Gene Sbal195_3923 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal195_3923 
Symbol 
ID5755742 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS195 
KingdomBacteria 
Replicon accessionNC_009997 
Strand
Start bp4627880 
End bp4628680 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content51% 
IMG OID641290269 
ProductABC-3 protein 
Protein accessionYP_001556343 
Protein GI160877027 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00893533 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTGATC TTGAACTGAT GTCGATTCTG TTGCCTGCAT TGGCAGCGGG GATCTTAGTG 
TTGTCGACGC ATATTGTACT TGGAAGACAA GTACTTAAGC GTGGCATCAT CTTTATCGAT
TTAGCGATAG CGCAAGTTGC CGCCTTAGGC GCGATTGTCG CTCACATGGA CCACAGATTA
GAAGACATGC CGTTTGCTAA TGTGTGGATG CCAGCGCTGT TTGCCCTCGC GGGCGCAGGG
TTTATTGCTT GGTTATCTAA GCGGATGGCG GGTGAGTTGG AGGCAATGAT CGGCTGCTTT
TATGTGTTGT CTGCGGTAGC GGCTATGTTG CTGCTGGCGA ACGACCCACA CGGCGCCGAG
CTGTTAAAGC AATTGATGTC AGGTCAGATC CTGTGGGTGA GTTGGTCACA ACTGATTTTG
CCGGCAGTAG TGTATTCACT GGTGTTGTTG GCGATATTCC TGCGTCCCCA GATGTTGGAT
GGTGCAGGGT TCTATCTGCT ATTTGCGTTG GTCATTACCT TGTCGGTTGA ATTAGTGGGC
GTTTATCTGG TGTTCAGTAC CTTGATATTG CCCGCTTTAG CACTGAACAA GTACCGCGGT
AAAGGTCGGT TATTTTACGC TTACCTCGTC GGTTTGTTGG GTTATGTTCT AGGATTAGTC
CTGTCGGCGA CGTTAGATCT ACCCAGCGGT GCGGCGATAG TCGCGACTTT GGCCGTGAGC
GCCTTAGTCA TCCGTTTTGT GTTAGCTAAA GTTGCGCCTC AGGCAACGGG ATCTGAAATC
CTGCCAAAGC ACCACGCTTA G
 
Protein sequence
MFDLELMSIL LPALAAGILV LSTHIVLGRQ VLKRGIIFID LAIAQVAALG AIVAHMDHRL 
EDMPFANVWM PALFALAGAG FIAWLSKRMA GELEAMIGCF YVLSAVAAML LLANDPHGAE
LLKQLMSGQI LWVSWSQLIL PAVVYSLVLL AIFLRPQMLD GAGFYLLFAL VITLSVELVG
VYLVFSTLIL PALALNKYRG KGRLFYAYLV GLLGYVLGLV LSATLDLPSG AAIVATLAVS
ALVIRFVLAK VAPQATGSEI LPKHHA