Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_3916 |
Symbol | |
ID | 5755735 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | + |
Start bp | 4618995 |
End bp | 4621901 |
Gene Length | 2907 bp |
Protein Length | 968 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641290262 |
Product | ATP-dependent helicase HepA |
Protein accession | YP_001556336 |
Protein GI | 160877020 |
COG category | [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGTTCG CCTTAGGTCA ACGTTGGATA AGTGATACCG AGTCAGAGCT TGGTTTAGGA ACTGTGGTTC AAGTAGAAGG CCGTATGGTC ACTGTTTTAT TCCCTGCCAC GGGTGAGAAC CGCATGTTCT CCCGAGCAGA AGCCCCTCTG ACACGCGTTA TATACAATCC CGGCGATTCG GTTGAAAGCC ATGAAGGCTG GAGCCTTGCG GTCAGCGAGT TGACCGAGAA AGACGGGATA GTGATCTATC ACGGCATTCA CAGTGAGACA GGCGAGCAAG TTACCCTGCG TGAAACCCTG CTGAACCACA ATATTCGTTT CAATAAACCC CAAGACCGTT TATTCGCCGG CCAAATCGAT CGCCTCGACC GTTTTGGTGT GCGTTATCAG TGCCAAATGT TGCGCCACAA ATTGGCCTCA TCGGATCTAC TTGGCCTGCA AGGTCCACGC GTTGGACTTA TTCCGCATCA AATGTGGATT GCCCATGAAG TCGGTCGTCG CTATGCACCG CGTGTACTGC TGGCCGACGA AGTGGGTTTA GGTAAAACCA TTGAAGCGGG TCTGATTATT CACCAACAAC TGCTGACTGG CCGCGCCGAA CGCATTCTGA TTATCGTGCC CGATACTTTG CGCCATCAGT GGTTAGTGGA AATGCTGCGC CGCTTTAACT TGCGCTTTTC GGTATTTGAT GAAGATCGTT GTGTAGAAGC CTATGCCGAT CACGACAATC CATTCTACAC AGAGCAGTTA GTGATTTGCT CACTCGAATT ACTGCGTAAG AAAAAACGTC TCGATCAAGC CCTAGATGCC GATTGGGATC TGTTAGTGGT TGACGAAGCG CACCACTTAG AATGGACCGA AGAAGCGCCA AGCCGTGCTT ATCAAGTAGT TGAGGCATTA AGCGAAGTGA TCCCAGGCGT TTTACTGTTA ACCGCAACGC CGGATCAACT TGGCCATGAA AGTCACTTCG CCCGTTTGCG TCTGCTCGAT CCGGATCGTT TCTACGATTA CGATGCCTTC CTAGCCGAAG AAGACAGCTA TAAAGACGTC GCCATTGCCG CCGAAGCCTT GGCTGGCAAC GCTAAATTAC CCGACGCCGC CATCAACAGC TTGACCGAAT TACTGGGCGA GAAAGACATC AGCCCAAGTA TTCGTTTAAT CCAAGCCGAC GGCATTGATG CTGAAGTACA GCAAGCCGCC CGCAGCGAAT TACTGCAAGA ATTACTCGAC CGTCACGGTA CTGGCCGCGT CTTGTACCGC AACAGTCGCG CCTCGGTAAA AGGCTTTCCT AAGCGTTTCT TTAACGCTTA TCCACACGCC ATGCCAGATC AATATCAAAC TGCCGCACGC GTCAGCGGCA TGATGGGCGG ACACAAGTCA TTAGAAGCGA AAGCGGCGCA AGCCCTTAGC CCTGAAAAGT TATATCAAGA ATTTGAAGAT AACAGCGCCA GTTGGTGGAA GTTCGATCCC CGTGTGGATT GGTTAATTGA GTTCTTAAAA TCACACCGCA GCAAAAAAGT GCTGATCATC GCCAGCCAAG CGGAAACCGC CCTGAGCTTA GAAGAAGCCC TGCGCACACG CGAAGGGATT CAAGCGACGG TATTCCACGA AGGCATGTCG ATTATCGAGC GCGATAAAGC CGGCGCTTAC TTTGCCCAAG AGGAAGGCGG CGCACAGGCG TTGATCTGTT CTGAAATTGG TTCTGAAGGC CGTAACTTCC AGTTTGCCAG TCACTTAGTG CTGTTCGATC TGCCGCTAAA CCCAGATCTA TTGGAACAGC GCATCGGTCG TTTAGACCGT ATCGGTCAGA AAAATGATAT CCAAATTCAC TTACCGTACC TTGAAGACAC CGCCCAAGAA CGTTTGATGC AGTGGTATCA CCAAGGGCTG AATGCCTTCG AACTCACTTG TCCGAGTGGC CACGTGCTTT ACAGTGAATT TGCCGAAGAT CTGTTAAACG TGCTTGTGGT TGATGACAGC GACGAGCTGA CAAACCTGCT CAATCACACC CAGAGCCGTT ATAAAGAACT CAAGCACGCC ATGGAGCAAG GCCGCGACAA GCTGCTGGAA ATCAACTCAC ACGGCGGCGA GAAGGCAATG GCTATCGTCC AGCGCCTCGC CCAGAATGAT GGTGATACCC ATTTGATCGG TTCAGTGATC CGTCTGTGGG ATATTATCGG TGTTGATCAA GAAGATAAGG GTGAAAACTC GATCATTCTG CGCCCGAGTG AGCACATGAT GTTCCCAACC TACCCTGGCT TGCCAGAAGA TGGCGTGACT GTGACCTTCG ACCGTGACAC AGCGTTATCT CGCGATGATA TTGCGCTGAT CACCCAAGAG CACCCACTGG TACAAACGGG GCTAGATCTG ATCACAGGTT CAGAAACCGG CACCACCAGC GTCGCGATTC TGAAGAATAA AGCCCTGCCT GCAGGTACCT TATTCTTAGA ACTCATCTAC ATGGCCGATG CTTCTGCACC TAAGTCGAGC CAGTTGTATC GTTATTTACC ACCGACACCC ATTCGCGTGT TGCTGGATAA AAATGGTAAC GACCTGTCGG CTAAAGTGGA TTACGCCAGT TTCGATAAGC AATTGAGCGC GGTGAATCGT CACATTGGCG GCAAGTTAGT CACCGCATCT CAGCCAATTC TGCATCCGTT ATTTGCTAAG GGTGAGGAAT ATGCTCAAGT GGTTGTGGAT GAAATGGTCG CCCAAGCCAG AGAGAAAATG ACTCAGCAAC TGAGCGCAGA GCTAAGTCGT TTAGAGTCAC TCAAGGCGGT GAACCCCAAT ATCCGTGAGG AAGAATTGGA ATACCTGCGC AATCAGATGC AAGAGTTAAA CACTTATCTG GATGCCAGCC AGTTACAACT CGATGCGATC CGTATGGTGC TCGTTAGCCA CGTATAG
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Protein sequence | MPFALGQRWI SDTESELGLG TVVQVEGRMV TVLFPATGEN RMFSRAEAPL TRVIYNPGDS VESHEGWSLA VSELTEKDGI VIYHGIHSET GEQVTLRETL LNHNIRFNKP QDRLFAGQID RLDRFGVRYQ CQMLRHKLAS SDLLGLQGPR VGLIPHQMWI AHEVGRRYAP RVLLADEVGL GKTIEAGLII HQQLLTGRAE RILIIVPDTL RHQWLVEMLR RFNLRFSVFD EDRCVEAYAD HDNPFYTEQL VICSLELLRK KKRLDQALDA DWDLLVVDEA HHLEWTEEAP SRAYQVVEAL SEVIPGVLLL TATPDQLGHE SHFARLRLLD PDRFYDYDAF LAEEDSYKDV AIAAEALAGN AKLPDAAINS LTELLGEKDI SPSIRLIQAD GIDAEVQQAA RSELLQELLD RHGTGRVLYR NSRASVKGFP KRFFNAYPHA MPDQYQTAAR VSGMMGGHKS LEAKAAQALS PEKLYQEFED NSASWWKFDP RVDWLIEFLK SHRSKKVLII ASQAETALSL EEALRTREGI QATVFHEGMS IIERDKAGAY FAQEEGGAQA LICSEIGSEG RNFQFASHLV LFDLPLNPDL LEQRIGRLDR IGQKNDIQIH LPYLEDTAQE RLMQWYHQGL NAFELTCPSG HVLYSEFAED LLNVLVVDDS DELTNLLNHT QSRYKELKHA MEQGRDKLLE INSHGGEKAM AIVQRLAQND GDTHLIGSVI RLWDIIGVDQ EDKGENSIIL RPSEHMMFPT YPGLPEDGVT VTFDRDTALS RDDIALITQE HPLVQTGLDL ITGSETGTTS VAILKNKALP AGTLFLELIY MADASAPKSS QLYRYLPPTP IRVLLDKNGN DLSAKVDYAS FDKQLSAVNR HIGGKLVTAS QPILHPLFAK GEEYAQVVVD EMVAQAREKM TQQLSAELSR LESLKAVNPN IREEELEYLR NQMQELNTYL DASQLQLDAI RMVLVSHV
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