Gene Sbal195_3905 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal195_3905 
Symbol 
ID5755724 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS195 
KingdomBacteria 
Replicon accessionNC_009997 
Strand
Start bp4602987 
End bp4603709 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content48% 
IMG OID641290251 
Productglycerophosphoryl diester phosphodiesterase 
Protein accessionYP_001556325 
Protein GI160877009 
COG category[C] Energy production and conversion 
COG ID[COG0584] Glycerophosphoryl diester phosphodiesterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTATTT TTGCTCACCG CGGCGCCAGC GGTTATCAGG CCGAAAATAC CTTAGCCGCC 
ATGGCTAAGG CGTTAGAATT AGGGGCTCAG GCCGTCGAGC TCGATGTGCA TAATGTCGAA
GGTGAGTTAG TCGTGTTCCA CGACCGAAGG CTTGATAATA AAAGCTCGGG CTCTGGCGTG
ATCCATTTAG TAAGTAAGGA TTATCTGGCG AGCATCAATG TGAAAGGCGA GCCCATACCG
ACGTTATGGC AAGTACTTGA GCTGATTGCG GGGCGCTGCA TAGTCAATAT TGAATTAAAA
GGTATTAATA CCGTCACGCC GTTAATCGAT TTATATCCAA AAGCCTTGAG TCAGCTTGGG
TTTACCCAGG AGCAGTTACT AATATCTTCT TTTAATCACC CGTATCTGCG CGAACTTAAA
CAAGCTTTGC CCAAGGCTTT AGTCGCGCCG CTGCTGGCCA GTATTCCACT TGATAATGCT
GCTGTGGTCG GAGAGCTAAA TGCTTACTCG CTGCACTTAG ATCTCAGCTT TATCAGCCAA
GCCTTAGTGG ATGACGCCCA CAACAGAGGC GCTAAGGTTT ATGTTTATAC GGTCGATCAT
AGCGACGATA TTCATGCACT TAAGCAGATG GGCGTCGATG GCGTGTTCAG CAATTATCCC
GACCGTGCCA TGCAAGCCTT AGATCAAGTG GCCACGGCCG ATTACTGTGG TTACTTTGAA
TAA
 
Protein sequence
MLIFAHRGAS GYQAENTLAA MAKALELGAQ AVELDVHNVE GELVVFHDRR LDNKSSGSGV 
IHLVSKDYLA SINVKGEPIP TLWQVLELIA GRCIVNIELK GINTVTPLID LYPKALSQLG
FTQEQLLISS FNHPYLRELK QALPKALVAP LLASIPLDNA AVVGELNAYS LHLDLSFISQ
ALVDDAHNRG AKVYVYTVDH SDDIHALKQM GVDGVFSNYP DRAMQALDQV ATADYCGYFE