| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_3898 |
|---|
| Symbol | |
|---|
| ID | 5755713 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009997 |
|---|
| Strand | - |
|---|
| Start bp | 4592721 |
|---|
| End bp | 4594205 |
|---|
| Gene Length | 1485 bp |
|---|
| Protein Length | 494 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 641290240 |
|---|
| Product | carbohydrate kinase, YjeF related protein |
|---|
| Protein accession | YP_001556318 |
|---|
| Protein GI | 160877002 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[S] Function unknown |
|---|
| COG ID | [COG0062] Uncharacterized conserved protein
[COG0063] Predicted sugar kinase |
|---|
| TIGRFAM ID | [TIGR00196] yjeF C-terminal region, hydroxyethylthiazole kinase-related
[TIGR00197] yjeF N-terminal region |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.0000196302 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCACAAG ATCTATCGCA ATTCCCCAAG GCCTTATTTA CCCAAGCACA AGTTCGCCAA
ACTGAACTGA GTGCTGTGTC GCAGGGAGCC TCTAGCCTCT ATGAATTGGT CGAGCGTGCT
GGCGCGGCGG CTTTTGAATG TTTAACAAAA CATAACCCCA ACGCCTCTTC TGTATTTATC
CTCGCTGGCA GCGGTAACAA TGGTGCCGAT GCCTTAGTGT GCGCCCGTTT AGCCCGTGCA
AGTGGTATGG CCGTTTCAGT GATGATGACG TCAGCGGCAG GCACGCCTGA GTGTCAGCAA
GCATTGGCCC ATTATCTTAA AGACGGCGGA GAGTTACTGC CGAAAGCCGT TGCGCCCATT
CTTGCGGCCA AGATCATCGT CGATGGTTTA CTCGGCACTG GTGTGCGAGA TGCGGTGCGC
GACGATATGG CTGAGTATAT TCGTGCCATT AATGATAATG CAGCTTGGGT ATTGAGCCTT
GATTTACCGT CTGGAGTGAT TGCCGATACC GGCGCTGTGG CGGGTGTTGC AGTGATGGCG
GATGTCACCT TGTGTTTTGG TGGCTGGAAG CAAGGTTTGT TAACGGGTAA GGCGCGGCAT
TACAGCGGCG AACTTGAATT TGCCGCTTTG GGATTAGCAC CTTTCTTCGC TGAAGCGAGT
GCACAAAGAG TCGGAAAAGA GACGCTTAAG GATTATTTTG CCGCCAGAGC GCGCGATAGC
CATAAAGGCC AGTCGGGCAA GGTCACTGTT ATTGGCGGTG ATATGGGTAT GGCTGGCGCC
GTGCGACTCG CCAGTGAGGC ATGTCTGCGT GCCGGTGCTG GATTAGTCAC AGTGATCAGT
CGACCTGAGC ATCAATTGAC TGTGAATGTC TCTCGTCCGG AATTGATGTT CTGGGGTTGT
GACTTAGTCG ATATGGAAGT GTATCTGCGC CTTGGTTGGG CGCAGGTTAT CGTGCTTGGC
CCTGGTTTAG GTAAGCATGA CTGGGGCTAT AACTTGTTTA AAGCCGTGGG CTTAAGCGAT
AAACCCTGTG TTTTGGATGC CGATGCCTTA AATCTATTGA GCAATGAACC GCGCCAGCAA
ACCAATTGGG TGCTAACACC GCATCCGGGT GAGGCTGCGC GTTTACTTGG CTGCTCTGTG
GCAGAAATTG AGCAGGATAG GTTTGCGGCT GTAAGGGCGA TACAGCAAAA GTATGGCGGT
GTTGTACTGC TAAAAGGCGC GGGAACGGTC ATTTTTGATG GCAAACAAAT GGTTGTTGCA
CCTGTAGGTA ATCCTGGGCT TGCCAGTGGT GGGTGTGGCG ATGTGTTATC TGGTATTATA
GGCGCGCTCA TGGCTCAGGG AATGGATAAC ATGCAGGCGA CTGTGCTGGG TGTTGTTGTA
CATGGTTGCG CTGCCGATCT TGCGGCAATA CAGGGAGAAC GTGGCATGTT AGCGAGCGAT
TTAATGCCTT TTATTCGCCA ATTAGTGAAT AGTGATTTAC TCTAG
|
|---|
| Protein sequence | MAQDLSQFPK ALFTQAQVRQ TELSAVSQGA SSLYELVERA GAAAFECLTK HNPNASSVFI
LAGSGNNGAD ALVCARLARA SGMAVSVMMT SAAGTPECQQ ALAHYLKDGG ELLPKAVAPI
LAAKIIVDGL LGTGVRDAVR DDMAEYIRAI NDNAAWVLSL DLPSGVIADT GAVAGVAVMA
DVTLCFGGWK QGLLTGKARH YSGELEFAAL GLAPFFAEAS AQRVGKETLK DYFAARARDS
HKGQSGKVTV IGGDMGMAGA VRLASEACLR AGAGLVTVIS RPEHQLTVNV SRPELMFWGC
DLVDMEVYLR LGWAQVIVLG PGLGKHDWGY NLFKAVGLSD KPCVLDADAL NLLSNEPRQQ
TNWVLTPHPG EAARLLGCSV AEIEQDRFAA VRAIQQKYGG VVLLKGAGTV IFDGKQMVVA
PVGNPGLASG GCGDVLSGII GALMAQGMDN MQATVLGVVV HGCAADLAAI QGERGMLASD
LMPFIRQLVN SDLL
|
|---|
| |