Gene Sbal195_3889 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal195_3889 
Symbol 
ID5755704 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS195 
KingdomBacteria 
Replicon accessionNC_009997 
Strand
Start bp4583152 
End bp4583742 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content49% 
IMG OID641290231 
Productubiquinol-cytochrome c reductase, iron-sulfur subunit 
Protein accessionYP_001556309 
Protein GI160876993 
COG category[C] Energy production and conversion 
COG ID[COG0723] Rieske Fe-S protein 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR01416] ubiquinol-cytochrome c reductase, iron-sulfur subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000705915 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAATG CGCCAGTCGA TACCGGACGT CGCAGATTCC TGACAGCCGC AACCGCCGTA 
GTAGGTGGTG CTGGTGCCGT CGCTGTAGCG GTTCCTTTCA TCAAGTCATG GAATCCGAGT
GCCAAAGCGA AAGCTGCAGG TGCACCGGTC GAAGTAAATA TCAGTAAAGT AGAGCCAGGT
CAGCTGATCC GTGTTGAGTG GCGTGGAAAA CCTGTATGGG TTGTCCGTCG CACAGATGCT
GTGATCAATG AACTGCCAAC ACATGATGAT AAGTTAAGAG ATCCAGCTTC TGCCGAAATG
CAGCAGCCTG ATTATGCAAC AAATCCTTTG CGCTCAATTA AGCCAGAGTA TTTTATTGCT
GTCGGTATTT GTACCCACCT CGGATGTTCA CCTACTTATT TGCCAGATTC ATTTGGTGAG
CAAGTTGAAG GTGTCACTTC TGGTTTCTTC TGTCCATGTC ATGGCTCTAA GTTCGATATG
GCTGGTCGCG TGTTCCAAGG CGTACCTGCT CCATTGAACC TAGTTATCCC TCCACATCAA
TACGTTGATG ATGGCACCGT GATTATCGGT GTAGATAAAG GAGTGGCGTA A
 
Protein sequence
MSNAPVDTGR RRFLTAATAV VGGAGAVAVA VPFIKSWNPS AKAKAAGAPV EVNISKVEPG 
QLIRVEWRGK PVWVVRRTDA VINELPTHDD KLRDPASAEM QQPDYATNPL RSIKPEYFIA
VGICTHLGCS PTYLPDSFGE QVEGVTSGFF CPCHGSKFDM AGRVFQGVPA PLNLVIPPHQ
YVDDGTVIIG VDKGVA