| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_3814 |
|---|
| Symbol | |
|---|
| ID | 5755629 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009997 |
|---|
| Strand | - |
|---|
| Start bp | 4494140 |
|---|
| End bp | 4495852 |
|---|
| Gene Length | 1713 bp |
|---|
| Protein Length | 570 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 641290156 |
|---|
| Product | gamma-glutamyltransferase |
|---|
| Protein accession | YP_001556234 |
|---|
| Protein GI | 160876918 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0405] Gamma-glutamyltransferase |
|---|
| TIGRFAM ID | [TIGR00066] gamma-glutamyltranspeptidase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATAAAAA CAATAAAATC AATTTGTACC TTAGTGACAG TGGCGACGGC AATATCGTCT
TCAGGAGTGA TGGCCATGGA TAGGATCACG GGTAAAGCCT TTGCGACGCG CTCAGAAGTG
TATGCCACCC ATGGAATGGC GGCGACCAGT CAACCACTCG CCACACAAGT CGCTATTGAT
ATACTCAAGC AGGGCGGTAG TGCGGTCGAT GCGGCGATTG CCGCGAATGC CATGCTAGGG
TTAGTCGAAC CAACGGGTTC GGGTGTTGGT GGTGACTTAT TTGCCATCGT CTGGAGCGCG
AAAGATAAAC GCCTCTATGG TCTTAACGCT TCGGGCCGCA GTCCAAAATC CTTAAGTTTA
GAAAAGCTTA AATCTCTCGG CTTAGACTAT TTACCGCCGC TTGGACCCTT GCCTGTTTCT
GTGCCCGGCG CTGTGGATGG CTGGTATGAA CTGCATAATA AGTTCGGCAA ATTAGCGATG
GCCGATAATC TTGCGCCCGC AATCCATTAC GCCCGTGATG GTTTCCCTGT GTCCGAACTC
ATCGCCTATT ACCTTGAGGG GAGTGGTAAA AAACTCGCTA AATTCCCCGG TTTTAAAGAA
ACCTATATGC CTAATGGCAA GATGCCAGCG GTGGGCGAAA TCTTTAAAAA CCCAGCGCTT
GCTAATACCT ATGAGAAAAT TGCCAAGGGT GGCCGCGATG CTTTCTATAA AGGCGATATC
GCCAAAAGTA TCGATAAGTA CATGAAATCC CAAGGTGGTT ATTTAAGTTA TGATGACTTA
GCGAGCCATA CTAGCGAATG GATAGATCCG GTTTCGGTGA ACTACCGTGG TTACGATGTA
TGGGAACTGC CGCCCAATGG TCAAGGCATT GCGGCGCTAC AAATCTTAAA AACCATGGAA
CCCTTTAATG TGGCTGCTAT GGGCTTTAAT AGCCCCGAAT ATGTGCATTT ATTTGTTGAA
GCCAAAAAAC TCGCCTTTGC CGACAGAGCT AAGTTTTATG CCGACATGGC CTTTAATAAA
GTGCCGGTTA ACGATTTGAT TTCGCAGCAA TACAATTATG ATCGCGCTAA GTTAATCGAT
CCCAATAAAG CGGCCAAGAG TGTTGATGCG GGTAATCCTG CGTTACAACA TGGCGATACT
GTATACCTGA CCACCGCCGA CAAAGACGGC AACATGGTGT CACTCATTCA AAGTAACTAC
CGTGGTATGG GTTCAGGAAT GACGCCGCCG GATCTCGGTT TTGTGCTGCA AGACCGTGGG
CAAATGTTTG ATTTAACTGA GGGGCGTTTT AATACCTACG CACCGGGCAA GCGTCCATTT
CATACCATCA TTCCCGCTTT TGTGACCAAA GACGGTAAAC CTTGGCTCAG CTTTGGGGTG
ATGGGCGGCG CGACTCAACC ACAGATGCAC GCGCAGATTC TAATGAACCT GATTGATTTT
AAAATGAACT TGCAAGAAGC GGGCGATGCC CCCAGAATTT TGCATATGGG TTCAACTGAG
CCCACCGGCG AAGTGATGAA TGACGGCGGC TACGTCAGTC TGGAATCGGG CTTCCCTGTG
GAAACGCGCC GTGAGCTTAT CAAGAAAGGT CATGTGCTGC GTGATGGACT TGGGGATTTT
GGCGGCTATC AAGCTATTGG ATTTAATGCT GAAACGGGCG TGTATCGTGG CGCTTCTGAG
AGCCGTAAAG ATGGTCATGC CGCCGGTTAT TAA
|
|---|
| Protein sequence | MIKTIKSICT LVTVATAISS SGVMAMDRIT GKAFATRSEV YATHGMAATS QPLATQVAID
ILKQGGSAVD AAIAANAMLG LVEPTGSGVG GDLFAIVWSA KDKRLYGLNA SGRSPKSLSL
EKLKSLGLDY LPPLGPLPVS VPGAVDGWYE LHNKFGKLAM ADNLAPAIHY ARDGFPVSEL
IAYYLEGSGK KLAKFPGFKE TYMPNGKMPA VGEIFKNPAL ANTYEKIAKG GRDAFYKGDI
AKSIDKYMKS QGGYLSYDDL ASHTSEWIDP VSVNYRGYDV WELPPNGQGI AALQILKTME
PFNVAAMGFN SPEYVHLFVE AKKLAFADRA KFYADMAFNK VPVNDLISQQ YNYDRAKLID
PNKAAKSVDA GNPALQHGDT VYLTTADKDG NMVSLIQSNY RGMGSGMTPP DLGFVLQDRG
QMFDLTEGRF NTYAPGKRPF HTIIPAFVTK DGKPWLSFGV MGGATQPQMH AQILMNLIDF
KMNLQEAGDA PRILHMGSTE PTGEVMNDGG YVSLESGFPV ETRRELIKKG HVLRDGLGDF
GGYQAIGFNA ETGVYRGASE SRKDGHAAGY
|
|---|
| |