| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_3757 |
|---|
| Symbol | |
|---|
| ID | 5755571 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009997 |
|---|
| Strand | + |
|---|
| Start bp | 4425645 |
|---|
| End bp | 4427333 |
|---|
| Gene Length | 1689 bp |
|---|
| Protein Length | 562 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 641290098 |
|---|
| Product | malate dehydrogenase |
|---|
| Protein accession | YP_001556177 |
|---|
| Protein GI | 160876861 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0281] Malic enzyme |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACGATA ATAAACGCCC CCTCTATCTT CCGTTTGCAG GACCTGCCAT TCTTGAAGCC
CCACTGATTA ACAAGGGCAG TGCATTTTCT GAAGAAGAGC GTATTTTCTT TAACCTCGAA
GGCTTAGTTC CCTATGCCAT TGAAACGATT GAGGAGCAGG CTTCCCGCGC CTACGATCAA
TTTAGAAGTT TCAACAACGA CTTAGACAAG CATATTTACC TACGTAATAT CCAAGACACT
AACGAGACCT TATTTTATCG TTTAGTGCAA AATAACATCA GCGAGATGAT GCCCATCATC
TATACGCCGA CGGTAGGTTT GGCTTGTGAA CGTTTCTCAA AAAACTATCG CCGCAACCGT
GGTTTATTTA TCTCCTATCC GAACAAAGAT AGGATCGATG ACATTCTCAA TAACTCGACT
CGCCAAAAAG TCAAAATCAT CGTTGTTACC GACGGTGAAC GTATTTTAGG CCTTGGCGAT
CAAGGTATTG GCGGCATGGG GATCCCTATC GGTAAGTTAT CACTCTACAC TAGCTGTGGT
GGCATCAGTC CGGCTTATAC TCTGCCTATC ACTTTAGACG TAGGCACAGA TAATCCGCAG
TTGTTAGAAG ATCCTATGTA TATGGGCTGG CGCCATCCGC GCATCGGTGG CGAAGAGTAC
GCCGAGTTTA TAGAAGCCTT TATGCAAGCT GTACATGTGC GTTGGCCAGA CACTTTGATC
CAATTCGAAG ACTTTGCCCA AAAGAATGCC ATGCCGATCT TAGAGCGTTA TAAAGATCGC
TATTGCTGCT TTAACGATGA TATTCAAGGT ACCGCAGCCG TTGCCGTCGG TTCATTGCTG
GCCGCTTGTA AAGCTGCAGG TACTGAATTA AATCAACAAC GTATTGCCTT CCTTGGTGCG
GGTAGCGCGG GTTGCGGTAT CGCCGAAGCT ATCGTGGCGC AAATGGTGTC CGAAGGGATC
AGCGACGAGC AAGCTCGTAC GCAAGTATGT ATGGTTGACC GTTGGGGCTT ATTGCTAGAC
AACATGCCTA ACCTGTTGCC ATTCCAGCAA AAATTGGCGC AGAAATGCAC CAATATCCAA
AACTGGAGTA ATTTCAGCGA CAATATTTCG TTATTGGATG TAGTTAACAA CGCTAAGCCA
ACCGTGCTGA TTGGCGTGTC CGGTGTACCG GGTCTGTTCA CCGAAGAAAT TATTCGCGCT
ATGCACAGCC ATTGTGCCCG CCCGATTATT TTCCCACTGT CGAACCCAAC CAGCCGTGTT
GAAGCGACGC CAAAGGACAT TTTGCATTGG ACCTCAGGTC AAGCACTCGT CGCCACGGGT
AGTCCGTTCG AGCCCGTTGT GGTCGATGGT GAAACCTATG AGATTGCCCA GTGTAACAAC
AGCTTTATCT TCCCAGGTAT TGGCTTAGGC GTTTTAGCCT CTGGTGCCCG CCACGTTTCC
GATGCCATGT TAATGGCATC AAGCCGCGCA CTTGCAGAAT GCTCGCCACT GGCAATCGAC
GGTAGCGGCC CATTATTACC TAAACTGGAA GATATCCACG CGGTCAGTAA ACACATCGCT
TTCGCCGTAG GTAAAGTCGC AGTTGAACAA GGTTTAACGC TGCCAATGAG CGATGAAATC
TTACAACAAT CAATTGAAGG CAATTTCTGG AGTCCAGAAT ATCGCCGCTA CAAACGCACT
TCGTTCTAA
|
|---|
| Protein sequence | MDDNKRPLYL PFAGPAILEA PLINKGSAFS EEERIFFNLE GLVPYAIETI EEQASRAYDQ
FRSFNNDLDK HIYLRNIQDT NETLFYRLVQ NNISEMMPII YTPTVGLACE RFSKNYRRNR
GLFISYPNKD RIDDILNNST RQKVKIIVVT DGERILGLGD QGIGGMGIPI GKLSLYTSCG
GISPAYTLPI TLDVGTDNPQ LLEDPMYMGW RHPRIGGEEY AEFIEAFMQA VHVRWPDTLI
QFEDFAQKNA MPILERYKDR YCCFNDDIQG TAAVAVGSLL AACKAAGTEL NQQRIAFLGA
GSAGCGIAEA IVAQMVSEGI SDEQARTQVC MVDRWGLLLD NMPNLLPFQQ KLAQKCTNIQ
NWSNFSDNIS LLDVVNNAKP TVLIGVSGVP GLFTEEIIRA MHSHCARPII FPLSNPTSRV
EATPKDILHW TSGQALVATG SPFEPVVVDG ETYEIAQCNN SFIFPGIGLG VLASGARHVS
DAMLMASSRA LAECSPLAID GSGPLLPKLE DIHAVSKHIA FAVGKVAVEQ GLTLPMSDEI
LQQSIEGNFW SPEYRRYKRT SF
|
|---|
| |