| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_3729 |
|---|
| Symbol | |
|---|
| ID | 5755543 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009997 |
|---|
| Strand | - |
|---|
| Start bp | 4395575 |
|---|
| End bp | 4397095 |
|---|
| Gene Length | 1521 bp |
|---|
| Protein Length | 506 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 641290070 |
|---|
| Product | diguanylate phosphodiesterase |
|---|
| Protein accession | YP_001556149 |
|---|
| Protein GI | 160876833 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2200] FOG: EAL domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGAAGAA AAATAGCAAA ATTAAATCTG CCATTGTGGC AATGGCTGGC AGTGATATTG
TTTCCCATCG GGGTTGCTGT GGTCGCAAGT TATCTTTCTG CACAGTATTT TGTGGAAGAT
AAAGTCAAAG GTGTGGGAGC TATTTATGTA GGCCACATAG ATACGTTGAT CTCTCATGCC
GATGAAATCA GCCATTATGC ATTGGCATTG AAGGATTCTG AGTGCCAAGA GTTATACAAC
TATATGTTGT TCCAACCTTA CTTCCGCTCT GCTTTAATAT TTGATTCACA ACGTGTTTAT
TGTTCATCTA AAACAGGTGA TATTGACGTA CCTTTAGGCA TAGTCAGTGC CACTGAAAAT
CTTGAAATAC CTAACCAGTT TATTATTGGC GGCACGCCTT TTATGCCTGA GGTGCCAGCG
ATAGTGGCAT CAAACTGGGA ACCGATATCT CAGCACGGCG CCGCTGTGAT TATTGAAGGG
AAATATTTAG TAGATTCCTT TGTACAGCCC GATGTGTTCC CTAGCGCTGT TGTGAATGTT
GCTTTAGCAA TCAATGGTAA AACGATTCCA GAGTCACTCG GATTTATGAA AAATGAGGTG
ATGACGCTCG ATTCTGATAA GCACAATTTT TCAGTGTTAC TAGAAATGTC ACCTGCTTTT
TTCTGGCATT TCTTTTGGAT ATTTTTGGCC ATCTCTTTGC CCGTTAGTAT CGGCTTGATT
ACGGGGACTA TCCTATTTGT GCTCTATTCA AGGGTCACTC GCCATTCCCT CGCCGATGAC
ATTCGCAGTG GGATAGAAAA CGAAGAGTTT TTCTTAGTTT ATCAGCCAGT GATTTGTGCC
GAGGACGGTA AGGCCAAGGG CGTTGAAGCA TTAGTGCGTT GGCAGCATCC GCAAATGGGC
TTAGTGCGGC CTGATTTGTT TATTCCCATT GCCGAAGAGG GCAAGTTAAT CGTCCCATTG
ACTAACTATA TTTTTGAGCG GGCATTAAAA GATTTTGCCG ATATCGAGGT CGAACCGGGT
TTTAGAATTG CGTTTAACGT GGCGCCAGAA CACTTTACGC AGGATGATAT TGAGTCGAAA
TTTATTCATC TGCGGGATTC ACTGGAACGT ATTGGCGTTA AGCCTTTGAT TGAAATCACC
GAACGGCAAT TGTTAACGCC GGATATTTGC CAGTGCATTG AAAGCTTGCG ACAGTTAGGA
ATTCTTGTGG CAATCGATGA CTTTGGTACT GGGCAAACCA CTTTATCCCT GCTGCAAACG
ATGCCGTTAG ACTATCTGAA AATTGATAAA TGCTTTATCG ATACCATAGG GCAAGATTCT
GTCACTTCCC ATGTGCTCGA TACTATTATC GAGCTCTCCC ACAAGATGAA CTATATTGTG
GTGGCAGAGG GGGTTGAGAC GCAGGAGCAG GCGGATTATT TAACCAGTCG CCAAGTGCAT
TTTTTACAAG GATATCTTTT TGCAAAGCCG ATGAAGCTGG CTGATTTAAA GTTATGGTTA
GTCGAGCATT TTAAACGTTA G
|
|---|
| Protein sequence | MRRKIAKLNL PLWQWLAVIL FPIGVAVVAS YLSAQYFVED KVKGVGAIYV GHIDTLISHA
DEISHYALAL KDSECQELYN YMLFQPYFRS ALIFDSQRVY CSSKTGDIDV PLGIVSATEN
LEIPNQFIIG GTPFMPEVPA IVASNWEPIS QHGAAVIIEG KYLVDSFVQP DVFPSAVVNV
ALAINGKTIP ESLGFMKNEV MTLDSDKHNF SVLLEMSPAF FWHFFWIFLA ISLPVSIGLI
TGTILFVLYS RVTRHSLADD IRSGIENEEF FLVYQPVICA EDGKAKGVEA LVRWQHPQMG
LVRPDLFIPI AEEGKLIVPL TNYIFERALK DFADIEVEPG FRIAFNVAPE HFTQDDIESK
FIHLRDSLER IGVKPLIEIT ERQLLTPDIC QCIESLRQLG ILVAIDDFGT GQTTLSLLQT
MPLDYLKIDK CFIDTIGQDS VTSHVLDTII ELSHKMNYIV VAEGVETQEQ ADYLTSRQVH
FLQGYLFAKP MKLADLKLWL VEHFKR
|
|---|
| |