| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_3706 |
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| Symbol | |
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| ID | 5755520 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009997 |
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| Strand | + |
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| Start bp | 4373098 |
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| End bp | 4373775 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641290047 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_001556126 |
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| Protein GI | 160876810 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.143352 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGATT TTATTTACCA ACCACCGACA ACTCCTTGGC TCGATATTCT TTATCAAGAT
AAAGACATTA TCGTCATCAA CAAACCTTCG GGATTGTTGT CTGTGCCCGG TCGCGATCCT
GCCCATTACG ACAGTGTCTA TGCTCGGGTA AAAGCTGAAC ATCCCCATAG CCAAATCGTC
CACCGCCTCG ATATGGCGAC CTCAGGCGTA ATCGTTGTCG CCCTTATTCG TAGCGCTGAA
CGTGAATTAA AACGTCAATT CCACGATAGA GAAACCAGCA AGACCTACTT TGCAAGGGTC
GCTGGCCATG TCAAAAATGA TACGGGTAGT GTTGATTATC CGCTGATCTG CGACTGGCCG
AATCGCCCAA AACAGAAAGT CGATCATCTT GTGGGCAAAC CGTCTTTGAC TCACTACCAA
GTAATAAGTC GTGCCAAACG CTCGACGCTG GTGAAACTCA CGCCAATCAC TGGCCGCTCA
CACCAATTGC GCGTGCATAT GATGGCGCTG GGCCATCCAA TCTTAGGTGA TGGTTTTTAC
GCCGATCCAC TGGCCAAATC CTTAGCGCCT CGCCTATTAC TGCATGCGGC AGAGCTCACC
ATCAAACATC CCTACACGGG TGTCAGTATG ACTTTCAGTG CAGAAGCGCC TTTTTGTGAG
CCTTTGGGCG AACAATGA
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| Protein sequence | MTDFIYQPPT TPWLDILYQD KDIIVINKPS GLLSVPGRDP AHYDSVYARV KAEHPHSQIV
HRLDMATSGV IVVALIRSAE RELKRQFHDR ETSKTYFARV AGHVKNDTGS VDYPLICDWP
NRPKQKVDHL VGKPSLTHYQ VISRAKRSTL VKLTPITGRS HQLRVHMMAL GHPILGDGFY
ADPLAKSLAP RLLLHAAELT IKHPYTGVSM TFSAEAPFCE PLGEQ
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