| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_3610 |
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| Symbol | mdoD |
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| ID | 5755424 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009997 |
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| Strand | - |
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| Start bp | 4249671 |
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| End bp | 4251359 |
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| Gene Length | 1689 bp |
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| Protein Length | 562 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641289953 |
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| Product | glucan biosynthesis protein D |
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| Protein accession | YP_001556032 |
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| Protein GI | 160876716 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3131] Periplasmic glucans biosynthesis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000323201 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.858477 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACCCA ATTTATTTCC CGAACAAAGA AACGTTTACC AACAATCGAT GGTGACAGTA
CCTTCGATTG AAGCCCAATC CTCCTCTCGT CGCGGCCGTT TGCAGCGCAT GGTTGGCAGC
GTATTGTTAA CCTGTAGCGT ATTGCTGAGT CTTTCGGCGT GTGCGGCGGG TAAGCAGGCG
TCACCACAAG AAGGTGAAGA GTTCAGTTAC GCTTGGCTTA AGGGCTATGC CCGTACTATG
GCTGCACAAC CCTATGAAAG CCATAAAGGC GAATTGCCTA AAAGCCTTCA GGGCATGAGC
TGGGATGATT ACCAACAATT CCACTTTAAG AAAAAAGCCG CACTGTGGCG CGATCAGGAC
TCGGAGTTTC GTGCCGAGCT GTTCCACCTA GGGCTGTATT TCGACACGCC AATTCACATC
TATGAGTTGA ATGAAGGCAA GGCCAAGTTA ATCGACTATT CGCCTTCTAT GTTCGATTAC
GGCAAGTCAA AGGTGAAAGG CAGTCAGTTG CCTAAGGATC TTGGCTTTGC GGGTTTCCGT
ATGCAGTTCA ATACCGATTG GGAACGTGAC GTTGTCGCTT TCCTTGGCGC CAGTTATTTC
CGCGCTGTGG GTCATGAGAT GCAATACGGC CTGTCGGCTC GTGGTTTAGC GGTGGATACT
GCGCTGCCAA AACCTGAAGA GTTTCCAATG TTCACCGACT TCTGGTTAGA AAAACCTAAA
CCAGGATCGA ACATCACGAC TGTGTATGCC TTGTTAGACT CTCCGAGTGT GACAGGCGCT
TACCGTTTCG ATATCGAGCC GGGTGAGCGT TTAAAAATGA AGGTGGATGT GGCTGTTTAT
CCACGTAAAG CGATTGAACG TTTAGGTGTC GCGCCACTGA CCAGTATGTT TATGGTGGGT
GAGAACGATC GCCGCACCGG TTACGACTGG CGTCCAGAAA TCCATGATAC CGATGGCTTA
GCCATGCACA CGGGGAATGG TGAATGGATT TGGCGTCCGC TAGGTAACCC AGAAAACCTG
CGATTCAACG CCTATAGCGA TGAAAATCCA AAAGGTTTTG GTTTACTGCA ACGTGATCGT
AACTTCGATC ACTATCAGGA CGATGGCGTG TTTTATGATA AACGCCCAAG CCTGTGGATT
GAACCAACCA GCAGTTGGGG CAAAGGTTCA GTGCAGTTAG TTGAAATCCC AACACTGGAT
GAAACCTTCG ATAACATAGT CGCATTTTGG AATCCTGCTG AGCCGATTGT TCCGGGTCAA
GAGCTGCTGT ATAGCTACAA CATGTATTGG GGCGGCATTC CACCGGTTCA ATCACCCCGT
GCTCGCGTTG TTGATACCTT CACCGGGATT GGCGGCGTAG TTGGCCAGAA ACGCAAATAC
TACAGTAAGC GTTTTGTGGT GGATTTCGCG GGCGGCACTT TGCCTATGAT AGGTAAAGAC
ACCCAAGTAA AAGCTGTGAT CACTGCATCT GAAGGCAAAG TCGAAATTGA ATCTGCCCGT
CCTCTAGCGT CCATTAATGG TTACCGCGCT ATGTTTGACG TAGTGCCCCC CGGAGACGGT
ACTGAGCCGA TTAACCTGAG AGTCTATTTG GAAGTCGATG GTCAGCCATT GTCTGAAACT
TGGATGTATC AGTGGAATCC GCCTGCTAAG GATGATCGTG AATTGCACAA TGCGGGTCAT
CTGCAATAA
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| Protein sequence | MQPNLFPEQR NVYQQSMVTV PSIEAQSSSR RGRLQRMVGS VLLTCSVLLS LSACAAGKQA
SPQEGEEFSY AWLKGYARTM AAQPYESHKG ELPKSLQGMS WDDYQQFHFK KKAALWRDQD
SEFRAELFHL GLYFDTPIHI YELNEGKAKL IDYSPSMFDY GKSKVKGSQL PKDLGFAGFR
MQFNTDWERD VVAFLGASYF RAVGHEMQYG LSARGLAVDT ALPKPEEFPM FTDFWLEKPK
PGSNITTVYA LLDSPSVTGA YRFDIEPGER LKMKVDVAVY PRKAIERLGV APLTSMFMVG
ENDRRTGYDW RPEIHDTDGL AMHTGNGEWI WRPLGNPENL RFNAYSDENP KGFGLLQRDR
NFDHYQDDGV FYDKRPSLWI EPTSSWGKGS VQLVEIPTLD ETFDNIVAFW NPAEPIVPGQ
ELLYSYNMYW GGIPPVQSPR ARVVDTFTGI GGVVGQKRKY YSKRFVVDFA GGTLPMIGKD
TQVKAVITAS EGKVEIESAR PLASINGYRA MFDVVPPGDG TEPINLRVYL EVDGQPLSET
WMYQWNPPAK DDRELHNAGH LQ
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