Gene Sbal195_3588 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal195_3588 
Symbol 
ID5755402 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS195 
KingdomBacteria 
Replicon accessionNC_009997 
Strand
Start bp4221217 
End bp4222392 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content48% 
IMG OID641289931 
Productaromatic amino acid permease 
Protein accessionYP_001556010 
Protein GI160876694 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0814] Amino acid permeases 
TIGRFAM ID[TIGR00837] aromatic amino acid transport protein 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.281237 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAGGCT CGATCGCCAT CGTTGCCGGG ACGGCCATTG GCGCAGGTAT GTTAGCCTTA 
CCTTTAGCTA CCGCGGCTTT AGGTATTATT CCAGCGTTAG TGTTACTCGT CGTTATTTGG
GGCGTTTCTG CCTATACCTC ATTACTGATG CTCGAAATTA ACTTACGCAC TGGCGTAGGT
GATAACGTGC ATGCTATTAC GGGTAAATTA CTGGGTAAAA AAGGTCAAAT AATTCAAGGA
GCTTCTTTCT TAAGTTTATT ATTTGCTTTG ACTGCGGCTT ATCTCACTGG TGGGTCATCG
CTATTAGTGC TTAAAGCGAA GAACATGTTT GATATCGTGC TTGATAATCA AGCCGCGGTA
TTGTTGTTCA CCTTAGTGCT CGGCGGATTT GCGGCGCTCG GAGTGGCTTG GGTCGATAAA
GTGTCCCGCT TCCTGTTTTC GTTAATGATT TTACTGCTGG TGGTTGTGGT GTTATTTCTC
CTGCCTGAAG TCAGTATTGC CAGCATGGCA ACGGGCGCGA TTGCCGAGTC GATGACCAGC
AGTTGGATGG CGGCGATTCC CGTAGTGTTT ACATCTTTTG GTTTCCACGT TTGTATCGCC
ACTTTAGTGC GTTATCTGGA TGGTGATGCA GTTTCACTGC GCAAGGTATT GTTAATTGGC
TCGACGATTC CACTGGCTTG TTATGTGCTT TGGTTATTGG TGACCTTAGG CACAGTAGGC
GGCTATGAAG TCAGTGGTTT TGAAGGTTCA TTACCGTCAC TGGTGACGGC ATTACAGGAT
ATTGCCCATA CGCCTTGGAT CAGCAAATGT ATTTCGTTAT TCGCCGATTT AGCCCTAGTG
ACCTCATTCC TAGGGGTGAC CTTAAGCCTG TATGACTTTG TCGCCGAATT AACCCGTGCC
AAAGAGACGT TTGCCGGCCG TATGCAGACC TGGTTGTTAA CCTTTATTCC GCCAGTATTA
TGTGCTCTGT ATCTGCCAGA AGGCTTTGTG GCGGTACTGG GATTCGCGGC TGTGCCATTG
GTGGTGATGA TCATCTTCTT GCCAATCGTG ATGGCATTGC GTCAACGCCA AACACAACCT
GGCGGTTATC AAGTGTCGGG TGGTTCTGCG GGCTTAGTGA TGGCAGGTTT GTTAGGCGCT
GTGATTGTGG GCGCGCAGCT ATTTGTTGCA ATCTAA
 
Protein sequence
MLGSIAIVAG TAIGAGMLAL PLATAALGII PALVLLVVIW GVSAYTSLLM LEINLRTGVG 
DNVHAITGKL LGKKGQIIQG ASFLSLLFAL TAAYLTGGSS LLVLKAKNMF DIVLDNQAAV
LLFTLVLGGF AALGVAWVDK VSRFLFSLMI LLLVVVVLFL LPEVSIASMA TGAIAESMTS
SWMAAIPVVF TSFGFHVCIA TLVRYLDGDA VSLRKVLLIG STIPLACYVL WLLVTLGTVG
GYEVSGFEGS LPSLVTALQD IAHTPWISKC ISLFADLALV TSFLGVTLSL YDFVAELTRA
KETFAGRMQT WLLTFIPPVL CALYLPEGFV AVLGFAAVPL VVMIIFLPIV MALRQRQTQP
GGYQVSGGSA GLVMAGLLGA VIVGAQLFVA I