Gene Sbal195_3572 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal195_3572 
Symbol 
ID5755386 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS195 
KingdomBacteria 
Replicon accessionNC_009997 
Strand
Start bp4200144 
End bp4201556 
Gene Length1413 bp 
Protein Length470 aa 
Translation table11 
GC content50% 
IMG OID641289915 
Producttranscriptional regulator 
Protein accessionYP_001555994 
Protein GI160876678 
COG category[E] Amino acid transport and metabolism
[K] Transcription 
COG ID[COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.529399 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGAAAT ACGAACAGTT AGCGCAGGAA TTAAAGACAC GAATAGCCCA AGGCGTCTGG 
CAGGCGGGGG ACAAGTTGCC GTCGCTGCGC CAAACTGTGG CTGATTCGGG TTTGAGTCTG
ATGACAGTGC TTAATGCCTA TCAGCTATTG GAAAGCCAAG GTGTGATTAC GGCGCAGGCA
AAATCGGGCT ATTTAGTGGC GCCGCAGCCA GAAACCTTTC GCTATCCCGA CCGTCAGCGG
CAGATCTATC TCTCTGATAA AGTTGATATT AACGAGTTTG TCTTCTCTGT TTTGCAGGCA
TCAAAACAGG CGGGGATAGT GCCCTTTGGC TCAGGTTTTC CCGATCCCAG TTTATTCCCG
CAGCAAGCGT TGGCGCGCTC ATTAGTCAAA GTCACTCGGC ACATGTCACC GTCTTTTGCC
GCCGATAATT TACCGCCGGG GAATGCGGGG CTGCGTAAGG CGATTTCCCA ACGTTATGCC
AAATTGGGCA TGAGCATTTC ACCCGATGAA ATCTTAATTA CTTCGGGCGC CATGGAGGCG
CTGAACTTGA GTTTAGCGAC CCTAACTCAA GCGGGGGATT GGGTAGTCAT TGAATCCCCG
ACCTTTTATG GCGCGATGCA GGCGATTGAG CGGCTTAAGC TTAAGGCCAT TGCGGTCGCG
ACGGATCCAC AACAGGGCAT TGATCTTGAG GCGCTAGCGG AAGTGTTAAA AACCTACCCA
GTGAAAACCT GCTGGTTGAT GAGTCAACAT CAAAACCCCT TAGGTTGTAG CTTGTCTGAT
ACTAAAAAAC AGGTGCTTTA TCAGTTACTA AACGAGCATA AAGTCAGTTT AATTGAGGAT
GATGTTTATC AAGAACTCTA TGTCGACTCC AGTGCGCCAA GGCCTGTAAA AGCCTTCGAT
ACCGAAGGAC GGGTGCTGCA CTGCGGCTCA TTTTCTAAGT CTTTGATTGC AGGTTATCGT
GTCGGCTGGG TGGCGGCGGG ACTGCATGCG CCGCAGTTAC AACGCTTGCA AGTTATGTCG
ACGCTATCGA CCAGTGCGCC CATGCAGCTT GCTATCGCCG ACTTTATTCA GTCTGCACAA
TATGAGCGCC ATTTGAAGCA GTTACGTAAA AAGTTAGCCG ATCGCAAATT GGCCATGTAT
CAGTTATTGC GCGCGCATCT GCCCGAGTCT GTTGGGGTTA ACTTTGCACA AGGCGGCTAT
TTTCTTTGGT TAGCGTTGCC TGCACACATG GATGCCACGC AAATTTATTC TCAGGGGATT
GAGCGCGGGA TCAGTATCGC TCCCGGAAAT CTCTTTAGTA ATCAGGTCGA GTTCCGCCAT
TTTATGCGCT TGAATGCCTC ATACGAGTGC TCGCCAGAGA TAGTCTCTGC TGTCGTAGTG
CTGGCCGAAC TCATCCGTAA CTATTCGCGC TAA
 
Protein sequence
MAKYEQLAQE LKTRIAQGVW QAGDKLPSLR QTVADSGLSL MTVLNAYQLL ESQGVITAQA 
KSGYLVAPQP ETFRYPDRQR QIYLSDKVDI NEFVFSVLQA SKQAGIVPFG SGFPDPSLFP
QQALARSLVK VTRHMSPSFA ADNLPPGNAG LRKAISQRYA KLGMSISPDE ILITSGAMEA
LNLSLATLTQ AGDWVVIESP TFYGAMQAIE RLKLKAIAVA TDPQQGIDLE ALAEVLKTYP
VKTCWLMSQH QNPLGCSLSD TKKQVLYQLL NEHKVSLIED DVYQELYVDS SAPRPVKAFD
TEGRVLHCGS FSKSLIAGYR VGWVAAGLHA PQLQRLQVMS TLSTSAPMQL AIADFIQSAQ
YERHLKQLRK KLADRKLAMY QLLRAHLPES VGVNFAQGGY FLWLALPAHM DATQIYSQGI
ERGISIAPGN LFSNQVEFRH FMRLNASYEC SPEIVSAVVV LAELIRNYSR