Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_3572 |
Symbol | |
ID | 5755386 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | - |
Start bp | 4200144 |
End bp | 4201556 |
Gene Length | 1413 bp |
Protein Length | 470 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641289915 |
Product | transcriptional regulator |
Protein accession | YP_001555994 |
Protein GI | 160876678 |
COG category | [E] Amino acid transport and metabolism [K] Transcription |
COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.529399 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGAAAT ACGAACAGTT AGCGCAGGAA TTAAAGACAC GAATAGCCCA AGGCGTCTGG CAGGCGGGGG ACAAGTTGCC GTCGCTGCGC CAAACTGTGG CTGATTCGGG TTTGAGTCTG ATGACAGTGC TTAATGCCTA TCAGCTATTG GAAAGCCAAG GTGTGATTAC GGCGCAGGCA AAATCGGGCT ATTTAGTGGC GCCGCAGCCA GAAACCTTTC GCTATCCCGA CCGTCAGCGG CAGATCTATC TCTCTGATAA AGTTGATATT AACGAGTTTG TCTTCTCTGT TTTGCAGGCA TCAAAACAGG CGGGGATAGT GCCCTTTGGC TCAGGTTTTC CCGATCCCAG TTTATTCCCG CAGCAAGCGT TGGCGCGCTC ATTAGTCAAA GTCACTCGGC ACATGTCACC GTCTTTTGCC GCCGATAATT TACCGCCGGG GAATGCGGGG CTGCGTAAGG CGATTTCCCA ACGTTATGCC AAATTGGGCA TGAGCATTTC ACCCGATGAA ATCTTAATTA CTTCGGGCGC CATGGAGGCG CTGAACTTGA GTTTAGCGAC CCTAACTCAA GCGGGGGATT GGGTAGTCAT TGAATCCCCG ACCTTTTATG GCGCGATGCA GGCGATTGAG CGGCTTAAGC TTAAGGCCAT TGCGGTCGCG ACGGATCCAC AACAGGGCAT TGATCTTGAG GCGCTAGCGG AAGTGTTAAA AACCTACCCA GTGAAAACCT GCTGGTTGAT GAGTCAACAT CAAAACCCCT TAGGTTGTAG CTTGTCTGAT ACTAAAAAAC AGGTGCTTTA TCAGTTACTA AACGAGCATA AAGTCAGTTT AATTGAGGAT GATGTTTATC AAGAACTCTA TGTCGACTCC AGTGCGCCAA GGCCTGTAAA AGCCTTCGAT ACCGAAGGAC GGGTGCTGCA CTGCGGCTCA TTTTCTAAGT CTTTGATTGC AGGTTATCGT GTCGGCTGGG TGGCGGCGGG ACTGCATGCG CCGCAGTTAC AACGCTTGCA AGTTATGTCG ACGCTATCGA CCAGTGCGCC CATGCAGCTT GCTATCGCCG ACTTTATTCA GTCTGCACAA TATGAGCGCC ATTTGAAGCA GTTACGTAAA AAGTTAGCCG ATCGCAAATT GGCCATGTAT CAGTTATTGC GCGCGCATCT GCCCGAGTCT GTTGGGGTTA ACTTTGCACA AGGCGGCTAT TTTCTTTGGT TAGCGTTGCC TGCACACATG GATGCCACGC AAATTTATTC TCAGGGGATT GAGCGCGGGA TCAGTATCGC TCCCGGAAAT CTCTTTAGTA ATCAGGTCGA GTTCCGCCAT TTTATGCGCT TGAATGCCTC ATACGAGTGC TCGCCAGAGA TAGTCTCTGC TGTCGTAGTG CTGGCCGAAC TCATCCGTAA CTATTCGCGC TAA
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Protein sequence | MAKYEQLAQE LKTRIAQGVW QAGDKLPSLR QTVADSGLSL MTVLNAYQLL ESQGVITAQA KSGYLVAPQP ETFRYPDRQR QIYLSDKVDI NEFVFSVLQA SKQAGIVPFG SGFPDPSLFP QQALARSLVK VTRHMSPSFA ADNLPPGNAG LRKAISQRYA KLGMSISPDE ILITSGAMEA LNLSLATLTQ AGDWVVIESP TFYGAMQAIE RLKLKAIAVA TDPQQGIDLE ALAEVLKTYP VKTCWLMSQH QNPLGCSLSD TKKQVLYQLL NEHKVSLIED DVYQELYVDS SAPRPVKAFD TEGRVLHCGS FSKSLIAGYR VGWVAAGLHA PQLQRLQVMS TLSTSAPMQL AIADFIQSAQ YERHLKQLRK KLADRKLAMY QLLRAHLPES VGVNFAQGGY FLWLALPAHM DATQIYSQGI ERGISIAPGN LFSNQVEFRH FMRLNASYEC SPEIVSAVVV LAELIRNYSR
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