| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_3566 |
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| Symbol | |
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| ID | 5755380 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009997 |
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| Strand | - |
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| Start bp | 4191210 |
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| End bp | 4192412 |
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| Gene Length | 1203 bp |
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| Protein Length | 400 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641289909 |
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| Product | TRAP dicarboxylate transporter- DctP subunit |
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| Protein accession | YP_001555988 |
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| Protein GI | 160876672 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4663] TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.123987 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGATTGC GGAGCTCTGT CCTGAGAGCA TGTTCACGTC TGTTAGAACC ATGGGCTCGT
TTGATGTCAG GGAGAGTATT AAAAATGCGT AAGTTTGGGA GTGTACTCGT CTTAATGCTG
CTGATGGGGC TGAGCGGTTG TAACCCCGCA GCCAGTGACG CGCAAAGCGT AGCCGTTTCC
CATGCCGCAA CGGATGACCC CCAAGCTATT CCCGCTATTG AATGGCGCCT TGCGACCTCT
TGGCCCAAAA ACTTCCCCGG TTTAGGTATG GCTCCAGAAC GCTTTGCCCA TTTAGTCGAT
GACATGTCTA ACGGTCGGTT AAAGATCCAG GTTTATGGCG CGGGTGAGTT AATGCCAGCG
TTTGCCGTAT TTGATGGTGT GAGTCAGGGC AAAATTCAAA TGGCCCATGC CGCTTCTTAT
TATTGGAAAG GCAAGGCACC CGCGGCGCAG TTTTTTTCAT CGATTCCTTT TGGTATGACA
GCGCAAGAAA TGAACGGCTG GTTGCACTAC GGCGGTGGCA TGGCGTTGTG GGAAGAAGTG
TATCGCCCCT TTGGCATCAT TCCCCTCGCA GGTGGCAATA CGGGCATGCA AATGGGCGGC
TGGTTCAATA AACCGATTAA TACGATTGCT GATTTTAAGG GGCTGAAGAT CCGCATGCCG
GGCTTGGGCG GCGAAGTCTT AAAACGTGTT GGCGCTATAC CTGTGAATAT GGCGGGGCGT
GAACTCTATG GTGCCCTGCA AACGGGCTCG ATTGATGCGG CAGAGTGGGT GGGGCCATTG
AACGACCTTG CTTTTGGTTT ACATAAAGTG GCGAAGTACT ACTATTACCC AGGTTGGCAT
GAGCCGGGTT CCAATATGGA ATTTTTGATT AATAAAGCTG CCTTCGAGAG TTTACCTCAA
GATTTACAAG CCATAGTGAG AGTCGCGGCG AGAGCGATTA ACCAAGATAT GCTCGATGAA
TACACGACCC GCAATGTGAC GGCCCTTGAA ACCTTAGTGA ATGATGAAGG GGTAGTGCTT
AAAGCATTTC CACCGAAAGT GTTGTTGGAA CTTGAGAAAA TCTCTAAACA AGTGATTGAA
GAACAAGCCA ATCAAGATCC TTTAATGCGC AAAGTGTACG CCGCCTATCA CGCCTACGAG
CAAGGTGTAC GCCAGTATCA TAAAATATCT GAGGATGCTT ACAGCCAACA GCGTCAACAC
TAA
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| Protein sequence | MRLRSSVLRA CSRLLEPWAR LMSGRVLKMR KFGSVLVLML LMGLSGCNPA ASDAQSVAVS
HAATDDPQAI PAIEWRLATS WPKNFPGLGM APERFAHLVD DMSNGRLKIQ VYGAGELMPA
FAVFDGVSQG KIQMAHAASY YWKGKAPAAQ FFSSIPFGMT AQEMNGWLHY GGGMALWEEV
YRPFGIIPLA GGNTGMQMGG WFNKPINTIA DFKGLKIRMP GLGGEVLKRV GAIPVNMAGR
ELYGALQTGS IDAAEWVGPL NDLAFGLHKV AKYYYYPGWH EPGSNMEFLI NKAAFESLPQ
DLQAIVRVAA RAINQDMLDE YTTRNVTALE TLVNDEGVVL KAFPPKVLLE LEKISKQVIE
EQANQDPLMR KVYAAYHAYE QGVRQYHKIS EDAYSQQRQH
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