Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_3444 |
Symbol | |
ID | 5755257 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | + |
Start bp | 4064158 |
End bp | 4064661 |
Gene Length | 504 bp |
Protein Length | 167 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641289786 |
Product | methylation site containing protein |
Protein accession | YP_001555866 |
Protein GI | 160876550 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4970] Tfp pilus assembly protein FimT |
TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00280491 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGCATTACC CAATCAATAA ACAAGATGCG GCTGGCTTTA CCTTGATAGA ACTGGTCGTG GTGATTATTG TACTTGGGAT CTTGGCAGTG ATTGCCGCGC CTAAATTTAT CGGTTTGAGT AAAGAGGCTC GGGTACAAAC CTTGAGCCAA TTACAGGCCA GCGTAAAAAC CGCCAACACA CTCGCCTACT CAAAAAACCA AATGCCCAGC CTGCGAAGCC AAGCCGTTGC AGGCCGCGAC GATATTATTG ATATCGACCT CAATGGTGAT GGCACGCCCG ATACCAGATT GAAATGGGGT TACCTTGATA ATACCGATGT GGAAAACTGG ATCACCTCAG ATGATAAGCT CATCATTCAA TATCAAGGCG TTGATATCAC TTACATAGGT TACGATCTTA ACAACAATAC CTTAGTGGAT GACGATCAAT GTTATTTCCG CTACACCCAA GCCAGCGATG CCAACACCCC GCCGCTATAT GATGTCAACA CCCAAGGTTG TTAG
|
Protein sequence | MHYPINKQDA AGFTLIELVV VIIVLGILAV IAAPKFIGLS KEARVQTLSQ LQASVKTANT LAYSKNQMPS LRSQAVAGRD DIIDIDLNGD GTPDTRLKWG YLDNTDVENW ITSDDKLIIQ YQGVDITYIG YDLNNNTLVD DDQCYFRYTQ ASDANTPPLY DVNTQGC
|
| |