| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_3425 |
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| Symbol | rrmJ |
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| ID | 5755231 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009997 |
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| Strand | - |
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| Start bp | 4043750 |
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| End bp | 4044379 |
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| Gene Length | 630 bp |
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| Protein Length | 209 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641289760 |
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| Product | 23S rRNA methyltransferase J |
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| Protein accession | YP_001555847 |
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| Protein GI | 160876531 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0293] 23S rRNA methylase |
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| TIGRFAM ID | [TIGR00438] cell division protein FtsJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000639122 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.0000926796 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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| |
Sequence |
| Gene sequence | ATGTCAGGTA TAAAACGTAC GGCCAGTTCT AATCGCTGGA TGCTAGAACA CTTTGATGAT
CACTATGTCA AACTCGCCCA AAAAATGGGC TTGCGATCTC GCGCTGCGTT TAAGCTTGAG
GAGATCCAGC AAAAGGATCA ACTGATTCGC CCAGGCATGA CTGTGGTTGA TCTCGGTGCT
GCTCCAGGAG GTTGGTCTCA AGTGGCAGTT AAATTAGCGG GAGATAGAGG TAAAGTCATC
GCCTGTGATA TTTTGCCTAT GGATCCCATC GTCGGGGTAG ACTTTCTGCA AGGGGATTTT
CGTGAAGATA AAGTCCTTCA AGCATTACTT ACTCGCGTCG GTGATGCTAA GGTTGACGTT
GTGTTGTCTG ATATGGCGCC CAACATGAGT GGTTCAGATA GTGTTGATCA ACCCCGTGCC
ATGTATTTAG TGGAGTTGGC GTTAGATATG TGCCATCAAG TATTGGCTCC TAATGGCTGT
TTTGCGGTAA AAGTCTTTCA GGGGGAGGGC TTTGACGAAT ACATGAAAGC GGTAAAAGCA
GTGTTTAAAG TCGTTAAAAC ACGTAAACCA GACTCTTCAC GGGCGCGTTC CCGTGAAGTC
TATCTTGTGG CGACTGGGTA CAAGTTGTAG
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| Protein sequence | MSGIKRTASS NRWMLEHFDD HYVKLAQKMG LRSRAAFKLE EIQQKDQLIR PGMTVVDLGA
APGGWSQVAV KLAGDRGKVI ACDILPMDPI VGVDFLQGDF REDKVLQALL TRVGDAKVDV
VLSDMAPNMS GSDSVDQPRA MYLVELALDM CHQVLAPNGC FAVKVFQGEG FDEYMKAVKA
VFKVVKTRKP DSSRARSREV YLVATGYKL
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