Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_3366 |
Symbol | |
ID | 5755170 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | - |
Start bp | 3975191 |
End bp | 3975961 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641289699 |
Product | deoxyribose-phosphate aldolase |
Protein accession | YP_001555788 |
Protein GI | 160876472 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0274] Deoxyribose-phosphate aldolase |
TIGRFAM ID | [TIGR00126] deoxyribose-phosphate aldolase [TIGR00148] UbiD family decarboxylases |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0201919 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00182556 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACTGATT TAAAAAAAGC AGCACAACGC GCCATCGAGT TAATGGACTT AACGACTTTG AATGATGACG ACACAGATCA AAAAGTGATC GACCTGTGCC ACAAAGCGAA AACGGCTGCG GGCAATACTG CCGCTATCTG CATTTACCCA CGTTTCATCC CGATTGCACG TAAGACGCTA GATGAAATCG GTGCTGAAGA TATCCAAATC GCCACTGTGA CTAATTTCCC CCATGGCAAC GATGACATCG CCATTGCCGT ACTAGAAACC CGCGCTGCCG TTGCCTATGG TGCCGACGAA GTTGACGTGG TATTCCCATA CCGTGCGCTG ATGGAAGGCA ATGAAACGAT TGGTTTTGAA TTAGTTAAAG CCTGTAAAGA AGCCTGTGGT GAAGTCTTGT TAAAAGTCAT CATCGAATCT GGCGTGTTAG CTGATCCTGC ACTTATCCGC CGTGCATCTG AGCTTTCAAT CGATGCGGGT GCCGACTTTA TTAAAACCTC TACGGGTAAA GTGCCTGTAA ACGCAACACT CGAAGCGGCT GAGATCATGT TAACTGTGAT CAGCGAAAAG AATACCCAAG TAGGCTTCAA GCCTGCCGGT GGTGTGCGTG ATGCTGCCCA AGCGGCTGAG TTCCTAGGTG TTGCAGAGCG TATTTTAGGT GCTGACTGGG TTTCTCCACG TACCTTTAGA TTTGGTGCTT CAAGCCTATT AAACAGCTTG CTGCACACAC TAGAACTGGC TGATGCGCCT AAGCCGACTC AAGGCTATTA A
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Protein sequence | MTDLKKAAQR AIELMDLTTL NDDDTDQKVI DLCHKAKTAA GNTAAICIYP RFIPIARKTL DEIGAEDIQI ATVTNFPHGN DDIAIAVLET RAAVAYGADE VDVVFPYRAL MEGNETIGFE LVKACKEACG EVLLKVIIES GVLADPALIR RASELSIDAG ADFIKTSTGK VPVNATLEAA EIMLTVISEK NTQVGFKPAG GVRDAAQAAE FLGVAERILG ADWVSPRTFR FGASSLLNSL LHTLELADAP KPTQGY
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