| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_3358 |
|---|
| Symbol | |
|---|
| ID | 5755162 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009997 |
|---|
| Strand | - |
|---|
| Start bp | 3964130 |
|---|
| End bp | 3965494 |
|---|
| Gene Length | 1365 bp |
|---|
| Protein Length | 454 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 641289691 |
|---|
| Product | DNA repair protein RadA |
|---|
| Protein accession | YP_001555780 |
|---|
| Protein GI | 160876464 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1066] Predicted ATP-dependent serine protease |
|---|
| TIGRFAM ID | [TIGR00416] DNA repair protein RadA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.918494 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAAGA ATAAAACAGC GTACGTGTGT AATGAGTGTG GACAAGACTT CCCCCGTTGG
CAAGGGCAAT GCAGTGCTTG TCAGGAATGG AATACGATTA CTGAGGTCAG GCTCGGTGCG
GCTTCCCCTG GGCGCAGTAC TAAGTTTGTC GGTTATGCCG GTGCGAGCAG TAATGAAGTG
AAGACATTAG ATCAAATCGA TCTCAATGCT CTGCCACGAA TATTGAGCCA TTTCGGGGAG
TTAGACCGAG TGCTCGGTGG CGGGATAGTG CCAGGTTCAG CCATTTTGAT TGGCGGACAT
CCTGGTGCGG GTAAGAGTAC GCTTTTATTG CAAACCCTGT GTCATCTGGC CGAGCAAATG
CCTGCACTGT ATGTCACGGG TGAAGAGTCC TTGCAGCAAG TGGCCATGCG TGCACATCGC
CTTGGTTTAC CAACCAATAA ACTGCGAATG TTGTCTGAAA CCAGCGTCGA ACAAATTTGC
GAAGTTGCCC TAAAAGAATT GCCAAAGGTC ATAGTGGTCG ATTCGATTCA AGTGATGCAC
ATGAGCGATG TGGCATCGAG CCCTGGTAGT GTATCGCAGG TCCGTGAGTC CGCCTCTTAC
TTAACGCGTT TTGCCAAGGA AAATGGCATA GCCGTGATCA TGGTCGGCCA TGTGACGAAA
GATGGCAGTC TGGCGGGACC TAAGGTATTG GAGCATTGCA TCGATTGCTC TGTGATGTTC
GAAGGCGATA GTGATAGTCG TTACCGCACC TTGCGTTCCC ACAAAAACCG GTTTGGCGCC
ATCAATGAGT TAGGTGTATT TGCCATGACA GAGCGCGGCT TAAAAGAAGT CGCCAATCCT
TCGGCAATTT TCCTTTCCCG TGGTGAAGAA GAATCTTCTG GCTCGCTTGT TATGGTGGTT
TGGGAAGGCA CGCGGCCGCT ACTTGTGGAA CTGCAAGTGC TGGTGGATAA CTCGGCCATG
TCTAACCCGC GCCGCGTGGC TGTGGGTATG GATGCCAACC GTTTAGCCAT GTTGCTTGCC
GTGATGCACC GCCACGGCGG TTTACAGATG TCAGATCAGG ACGTATTTGT GAACGTGGTG
GGCGGCGTGA AAGTAACGGA AACCAGTGCC GACTTAACGC TACTCTTGGC TATGGTATCG
AGTTTTCGCG GGGATATTTT ACCCAGCGAT TTAGTCGCCT TTGGTGAAGT GGGATTATCT
GGCGAAATTC GTCCAGTGCC CAATGGCCAA GAGCGATTAA TCGAAGCTGC TAAGCATGGT
TTTAAGCGCG CCATTGTGCC AAAGGCCAAT GTGCCGAAAA AGCCTCCTGC GGGAATGGAA
GTCGTGGGTG TATCTAAGTT ATCCGAAGCG CTAGAAGCGA TTTAG
|
|---|
| Protein sequence | MAKNKTAYVC NECGQDFPRW QGQCSACQEW NTITEVRLGA ASPGRSTKFV GYAGASSNEV
KTLDQIDLNA LPRILSHFGE LDRVLGGGIV PGSAILIGGH PGAGKSTLLL QTLCHLAEQM
PALYVTGEES LQQVAMRAHR LGLPTNKLRM LSETSVEQIC EVALKELPKV IVVDSIQVMH
MSDVASSPGS VSQVRESASY LTRFAKENGI AVIMVGHVTK DGSLAGPKVL EHCIDCSVMF
EGDSDSRYRT LRSHKNRFGA INELGVFAMT ERGLKEVANP SAIFLSRGEE ESSGSLVMVV
WEGTRPLLVE LQVLVDNSAM SNPRRVAVGM DANRLAMLLA VMHRHGGLQM SDQDVFVNVV
GGVKVTETSA DLTLLLAMVS SFRGDILPSD LVAFGEVGLS GEIRPVPNGQ ERLIEAAKHG
FKRAIVPKAN VPKKPPAGME VVGVSKLSEA LEAI
|
|---|
| |