| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_3356 |
|---|
| Symbol | |
|---|
| ID | 5755160 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009997 |
|---|
| Strand | - |
|---|
| Start bp | 3962694 |
|---|
| End bp | 3963404 |
|---|
| Gene Length | 711 bp |
|---|
| Protein Length | 236 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 641289689 |
|---|
| Product | DNA-binding transcriptional regulator TorR |
|---|
| Protein accession | YP_001555778 |
|---|
| Protein GI | 160876462 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTTATA GTGTGCTCGT TGTCGATGAT GAAGCGGTTA TTCGTGCGCG ATTGAAGGGA
TATTTTGAAA AGGAAGGTTA TCGCGTCGTT GAAGCTGCCG ATGGCGAGCA AATGTGGTAC
GAATTTAATC GCCAACATAT CGATTTGATC ATGCTAGATA TCAATTTGCC CGGTGTCGAT
GGTTTGAGCC TGACACGTGA GCTGCGCAGT CGCTCCCATG TGGGCATCAT TCTGGTGTCT
GGGCGGGATG AATCTATTGA CAAAATCGTT GGTCTCGAAA TGGGCGCCGA TGATTATGTG
ACTAAACCTT TCGAGCTGAG GGAGTTGCTG GTTAGGGTAA AAAACCTTCT GTGGCGGATT
TCCCTTGTGA AGCAAGCTGA GCTGGCGGTC GCCGAAGAAT TATCTCAACC GGACGATGTG
ATCAGTTTCG AAGGTTATCA ACTCGAACTC AACAGCCGCA AATTACGCCA TGGTGATGCA
TTGATCAAAC TCACCAAAGC GGAATTCGAG CTACTGGCCG CATTTGCCCT GCATCCGCAG
CAAGTCTTAT CCCGCGAGCG TTTAATGCAG CAAACCAGCC ACCGTAATCT GGATGTCAAT
GACAGAACGA TCGATGTGAT CATTCGCCGC CTTCGCAATA AACTCGACAC TGAATTGTTT
GTCACTATTC ATGGCGAAGG CTATTTATTT GCCGCTAAAG TGGACGATTA A
|
|---|
| Protein sequence | MAYSVLVVDD EAVIRARLKG YFEKEGYRVV EAADGEQMWY EFNRQHIDLI MLDINLPGVD
GLSLTRELRS RSHVGIILVS GRDESIDKIV GLEMGADDYV TKPFELRELL VRVKNLLWRI
SLVKQAELAV AEELSQPDDV ISFEGYQLEL NSRKLRHGDA LIKLTKAEFE LLAAFALHPQ
QVLSRERLMQ QTSHRNLDVN DRTIDVIIRR LRNKLDTELF VTIHGEGYLF AAKVDD
|
|---|
| |