| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_3313 |
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| Symbol | |
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| ID | 5755117 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009997 |
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| Strand | + |
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| Start bp | 3905095 |
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| End bp | 3906204 |
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| Gene Length | 1110 bp |
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| Protein Length | 369 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641289646 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001555735 |
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| Protein GI | 160876419 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000984298 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.15916 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAA CCATTATTGC CATTGCCCTG CTTGCGGTTA TCGCCACAGC GGTGAGTTTT
AGTGATGTCC TTCAAGCAGC CAAACCCGAA AGCGCTCCCC ACCTTATGCG TGCCGTTCCA
GTGGTCACGG GGGAAGTCGT TGAATATCCG TTAGCACAAT CTATCTCGCT TATCGGCAAA
CTCGCTGCCG AACGCGCGGT GATCATAGCG CCGCAAGTGA CAGGTAAGAT TAAGCAAGTC
GCCGTGACCT CAAACCAAGC GGTGAAAAAA GGCCAGTTGC TCATCGAACT CGATGATATG
AAAACCCAAG CCGCCGTCGC CGAGGCTAAT GCGTTTCTCA ACGATGAAAA ACGTAAACTC
AAAGAATTTG AAAAACTGAT CAGCCGTAAC GCCATCACCC AAACCGAGAT TGACGCACAA
AAAGCCAGTG TGGATATCGC CCAAGCACGC TTAGCTTCAG CCCAAGCCGA TTTACATTAC
CACTCGCTAA TTGCGCCGTT TGCGGGCAAT ACGGGACTGA TTAATTTCAG CGAAGGCAAG
ATGGTCAGCA TAGGCACTGA ATTAATGTCG CTGGATGATT TATCTAGCAT GCGCCTCGAC
TTACAAGTGC CAGAGCATTT CCTGTCGCAA TTGAGCATAG GAATGCAAGT GGCGGCCACC
AGCCGTGCTT GGCCGGATGA AACCTTTACT GGCAAAGTTG TCGCTATCGA TCCACGCGTC
AATGAAGAAA CCTTAAACCT TAAAGTGCGG GTGCAATTCG ACAACCCAAA AAATCGCTTA
AAACCCGGCA TGATGATGTC ATCCACTATC ACGTTCCCTG CAATTTCAGC ACCTATGGTG
CCAGTACAAG CCCTTGAATA TTCAGGCACT AAACGTTACG TGTACGTAGT TAGCGCCGAT
CACATCGCCA ACCGCACCGA AGTGCAGTTA GGTGCGCGTA TCGATAACCA AGTCTTGATT
GAAAACGGTT TGAACATAGG TGACAAAGTC GTCGTACAAG GCTTAGTGAA TATGCGCGAT
GGCCTGAAAA TCAATGAAGT GACGCTCGAT GCCAAGGCAT CTACCCGTGC GGCTGAGCTT
TCAAGCCCAA AAGCTACGGA GACTAAATAA
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| Protein sequence | MKKTIIAIAL LAVIATAVSF SDVLQAAKPE SAPHLMRAVP VVTGEVVEYP LAQSISLIGK
LAAERAVIIA PQVTGKIKQV AVTSNQAVKK GQLLIELDDM KTQAAVAEAN AFLNDEKRKL
KEFEKLISRN AITQTEIDAQ KASVDIAQAR LASAQADLHY HSLIAPFAGN TGLINFSEGK
MVSIGTELMS LDDLSSMRLD LQVPEHFLSQ LSIGMQVAAT SRAWPDETFT GKVVAIDPRV
NEETLNLKVR VQFDNPKNRL KPGMMMSSTI TFPAISAPMV PVQALEYSGT KRYVYVVSAD
HIANRTEVQL GARIDNQVLI ENGLNIGDKV VVQGLVNMRD GLKINEVTLD AKASTRAAEL
SSPKATETK
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