| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_3298 |
|---|
| Symbol | |
|---|
| ID | 5755102 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009997 |
|---|
| Strand | - |
|---|
| Start bp | 3889407 |
|---|
| End bp | 3890378 |
|---|
| Gene Length | 972 bp |
|---|
| Protein Length | 323 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 641289631 |
|---|
| Product | thiamine-monophosphate kinase |
|---|
| Protein accession | YP_001555720 |
|---|
| Protein GI | 160876404 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0611] Thiamine monophosphate kinase |
|---|
| TIGRFAM ID | [TIGR01379] thiamine-monophosphate kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.000889615 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 1 |
|---|
| Fosmid unclonability p-value | 0.000117497 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | GTGCCAAACT GTACAGTGAA AGAATTCCAA TTAATTGAAT GTTATTTTAG CAACCGCGGC
CCCACTCGCC GTGATGTGAA GCTTGGCATC GGTGACGATT GCGCTTTAGT GCAACCCGCA
GAAAACAAGT CGATTGCTAT CTCCTGTGAC ACCTTAGTCG AAAATGTCCA TTTCTTCCCC
GATATGCCTC CTGCAGCCTT AGGTTACAAA GCCTTAGCAG TAAATTTATC TGATCTGGCT
GCCATGGGCG CAGAACCCGC GTGGATGACG CTTGCCTTGA CGCTACCCGA AGTTGATGAA
ACTTGGCTCA GTGGTTTTAG CGAAGGTTTA TTTGAAGCGG CCGATTACTA TGGCATCGCC
TTAATTGGCG GCGATACGAC TCGTGGCCCA CGGGCGATTA ATATCACAGT ACACGGCCAA
GTCCCGCAGG GTAAGGCTCT CACGCGTCAT GGTGCTAAAG CCGGTGATTG GATTTATGTC
ACGGGCACGC TCGGAGATTC GGCCTTAGGT CTGGATATCA TTCGCGGCGC GCAACAGGCC
AGAGCTGAGC ACAAAGAATT CCTGATTAAT CGCCATTATC GCCCAACACC AAGAGTCTTA
GCGGGCCAAG CTTTGCGTTC GCTAGCCTCC AGTGCTATCG ACCTTTCCGA CGGGTTTATC
TCGGATATCG GTCATGTGCT TAAGGCTTCG GCAGTTGGTG CGGTTGTCGA TGTTAATTGC
ATCCCGCTTT CGCGTGCGAT GCAAGATACC GTCTGTGAGG AGCATGCCTT AGGTTATGCA
CTGACGGGCG GCGAAGATTA CGAATTGTTG TTCACCGTTC CTGAGGCGCA AAAAGGCGCG
CTTGAGACGG CATTAAGCCA TGCAGGAGCA AAGTTTGTTC GTGTTGGGCA AATTTGTGCG
GGCAGTAAGC TCAAGTTGCA ACTCAATGGT GAGCCGTTTA CGCCTCCATA TCATGGTTTC
GAGCACTTCT AA
|
|---|
| Protein sequence | MPNCTVKEFQ LIECYFSNRG PTRRDVKLGI GDDCALVQPA ENKSIAISCD TLVENVHFFP
DMPPAALGYK ALAVNLSDLA AMGAEPAWMT LALTLPEVDE TWLSGFSEGL FEAADYYGIA
LIGGDTTRGP RAINITVHGQ VPQGKALTRH GAKAGDWIYV TGTLGDSALG LDIIRGAQQA
RAEHKEFLIN RHYRPTPRVL AGQALRSLAS SAIDLSDGFI SDIGHVLKAS AVGAVVDVNC
IPLSRAMQDT VCEEHALGYA LTGGEDYELL FTVPEAQKGA LETALSHAGA KFVRVGQICA
GSKLKLQLNG EPFTPPYHGF EHF
|
|---|
| |