Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_3277 |
Symbol | ispD |
ID | 5755081 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | - |
Start bp | 3858058 |
End bp | 3858849 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641289610 |
Product | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
Protein accession | YP_001555699 |
Protein GI | 160876383 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase |
TIGRFAM ID | [TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.576784 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAGAGC TAGGACATTT AGATCTTGGA TTAAGCGAAC AATCCAATCC AGGCAGTCAA TCTGAGCCGG TAATGCAAAC TGAATTGCAG CGCCAAGCTG AGCATATCAC TCAAGCTGTG GTGGCTATTG TTCCCGCTGC GGGCATTGGT AGCCGCATGG GCGCCGACAG ACCTAAACAA TATCTTGAGG TTTGCGGCCA GAGTATTCTC GGCCATACTT TAGATAAGCT GTTGTCTCAC CCGCACATTT CCAACGTCAT CGTCGCCTTA CATCCGAATG ATACTATCTT CAATACCTTG CCACAGGCCG CGCATCCTAA ATTGACCACA GTATTAGGTG GCGGTGAGCG CGCTGATTCT GTGTTGGCGG CGCTGCAAAT TGCGCCCGAG CACAGTTGGG CATTAGTGCA TGATGCGGCA AGACCTTGTT TAACCGCGAC GGATATCGAC AAGTTACTCG CATCCAGAGT GCAATTTCCC CAAGGCGCGA TTTTGGCCAT GCCAGTGCGC GATACCATGA AGCGCGCCAA TAAACAGGGC GAAATCTGCG CTACTGTGTG CCGCGATAAT TTATGGCATG CATTAACGCC GCAGTTATTT CAGGCAGCGC AACTAAAAGA TTACCTCAAT GCCGCTCTGG CGGCAGGTGT GGTGGTGACA GATGAGGCTT CGGCGATGGA ATGGGCGGGC ATTTCACCTG GACTCGTTTC GGGCCGTGCT GACAATATAA AAGTGACGCA TCCCGATGAT TTGGGATTGG CCGAATTGTT TTTAATGCGT GCCGCAAAAT AG
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Protein sequence | MSELGHLDLG LSEQSNPGSQ SEPVMQTELQ RQAEHITQAV VAIVPAAGIG SRMGADRPKQ YLEVCGQSIL GHTLDKLLSH PHISNVIVAL HPNDTIFNTL PQAAHPKLTT VLGGGERADS VLAALQIAPE HSWALVHDAA RPCLTATDID KLLASRVQFP QGAILAMPVR DTMKRANKQG EICATVCRDN LWHALTPQLF QAAQLKDYLN AALAAGVVVT DEASAMEWAG ISPGLVSGRA DNIKVTHPDD LGLAELFLMR AAK
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