| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_3234 |
|---|
| Symbol | |
|---|
| ID | 5755030 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009997 |
|---|
| Strand | - |
|---|
| Start bp | 3801695 |
|---|
| End bp | 3803050 |
|---|
| Gene Length | 1356 bp |
|---|
| Protein Length | 451 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 641289559 |
|---|
| Product | short chain fatty acid transporter |
|---|
| Protein accession | YP_001555656 |
|---|
| Protein GI | 160876340 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG2031] Short chain fatty acids transporter |
|---|
| TIGRFAM ID | [TIGR00366] conserved hypothetical integral membrane protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTAAACA AAGCGGCAAA ACCTTTGGTC AAACTCGTCG ACCGATATCT ACCCGATCCC
TATATTTTCG TCCTTTTACT CACCTTAGTG GTGTTAATTG CAGCTGTGGT CGCAGAACAC
AAAAGTCCGC TGGAAGTCAT CAATTATTGG GGCGATGGCT TTTGGACCTT GCTGAGTTTT
TCGATGCAGA TGCTGTTAGT GCTGGTGGCG GGATTCATGC TGGCAAGCTC ACCGCCGATT
AAAAAGTTGC TTGATGCGAT TGCGGGGTTA GCTAAATCGG CACCGCAAGC CATTATTTTA
GTAACCTTGG TCTCACTGGC CGCCAGTTGG GTTAACTGGG GATTCGGACT AGTGGTGGGC
GCGTTATTTG CCAAAGCCTT AGCGCGTAAA GTGAAAGTGG ATTATCGGCT GCTGGTCGCC
AGCGCCTATT CTGGCTTTGT GGTTTGGCAT GGTGGGCTTG CGGGTTCTAT CCCGTTAACT
ATAGCAACGG CGGGGCATTT CTCAGAAGCA CAAATTGGCA TTATCCCCAC CAGTGAAACC
ATTTTCGCTA GCTTTAACTT ATTGTTAGTG GCGATTCTGT TTGTGGTCAT GCCCTTAGTG
AATCGCTTTA TGTTGCCTGA AGGCAAGGAC AGCATTTATG TCGACCCAAG CGCCCTTGAT
GACAAAGGCA GCGAACCCGC AGCTTCGGCG CTGGAGCTTA ACCCTGCCAA TGTGAGCGAG
TGTCAGCTTG AAAGCCGACC TGCGGATAAG TTAGAAAATA GCCGCTTACT CGGCTGGAGT
GTCGGTGGCG CTGGGCTTGT GTACTTAGGC TATTACTTTT GGGTACAGGG CGGCAGCTTA
AACCTTAACT TAGTGAACTT CTTATTCTTG TTCCTCGCCA TCCTCTTACA TCAAACGCCA
CGCAGTTTAT TAACCAGCTT GAATGAGGCC ATTAAGGGCG GCGCAGGGAT TGTGATCCAA
TTCCCTTTCT ATGCGGGCAT TATGGCGGTG ATGGTGCAGT CGGGTTTAGC CCAAAGTATT
TCGGAAGGTT TTGTGGCCAT AGCCAGTGCC GAGAGCCTGC CATTTTGGAG CTTTATCAGT
GCGGGAATTG TGAATATTTT TGTGCCATCG GGTGGTGGTC AGTGGGCCGT GCAGGCGCCG
ATTATGTTAC CCGCTGCCGA AGCCTTGGGC GCCGATGTTG CTCGGGTAGC TATGGCCGTA
GCTTGGGGTG ATGCCTGGAC TAACCTTATT CAACCTTTCT GGGCATTGCC CGTGCTGGCA
ATTGCGGGCT TAAAAGCGCG GGATATTATG GGCTTTTGTT TAATGCAGCT GATGATCACA
GGCGTGATTA TCAGTATCGC GTTGAGCTGG TTTTAA
|
|---|
| Protein sequence | MLNKAAKPLV KLVDRYLPDP YIFVLLLTLV VLIAAVVAEH KSPLEVINYW GDGFWTLLSF
SMQMLLVLVA GFMLASSPPI KKLLDAIAGL AKSAPQAIIL VTLVSLAASW VNWGFGLVVG
ALFAKALARK VKVDYRLLVA SAYSGFVVWH GGLAGSIPLT IATAGHFSEA QIGIIPTSET
IFASFNLLLV AILFVVMPLV NRFMLPEGKD SIYVDPSALD DKGSEPAASA LELNPANVSE
CQLESRPADK LENSRLLGWS VGGAGLVYLG YYFWVQGGSL NLNLVNFLFL FLAILLHQTP
RSLLTSLNEA IKGGAGIVIQ FPFYAGIMAV MVQSGLAQSI SEGFVAIASA ESLPFWSFIS
AGIVNIFVPS GGGQWAVQAP IMLPAAEALG ADVARVAMAV AWGDAWTNLI QPFWALPVLA
IAGLKARDIM GFCLMQLMIT GVIISIALSW F
|
|---|
| |