| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_3211 |
|---|
| Symbol | |
|---|
| ID | 5755007 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009997 |
|---|
| Strand | - |
|---|
| Start bp | 3779455 |
|---|
| End bp | 3780954 |
|---|
| Gene Length | 1500 bp |
|---|
| Protein Length | 499 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 641289536 |
|---|
| Product | deoxyribodipyrimidine photo-lyase |
|---|
| Protein accession | YP_001555633 |
|---|
| Protein GI | 160876317 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0415] Deoxyribodipyrimidine photolyase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.941968 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACATCAG TTAACGATTC AATGCCAGTA GATTCAATGC GAATAGAAGT GCAGGGCAAT
AATGCACTGA TGTGGTTTCG CCAAGATTTA CGCCTTGCCG ATAATCAGGC GCTAAGTGCA
GCCTGTGATT GGGCGCGGGA GAATGGCGTG GCACTTAAGG CCATTTATAT CGCTACGCCA
ACTCAGTGGC AACGCCATGA TGTGGCGCCC ATTCAGTTAG ATTTTATCGA ACGTCACATC
AATCTGCTTG CCCAAGGGCT GGCGAGTTTG GGGATTACAT TCGAATTAAT TCAGTTAGAT
ACCTTTGCCG ATGTGCCAGC GTTTATCAGT GATTACTGCC AGCAGCAAGG TATTAGCCGC
GTGTTTGCAG GCAGTGAGCC TGAGATTAAC GAGCAACAGC GTGACCAAGC CTGTATTCAG
GCTGGTATTC CTCTGGTGCT AACCGAAGAG CATTGTTTGC TTAAGCCGGG CACAGTGCTG
AACTTGTCCG GCGACATGTA TAAGGTTTTC ACCCCTTTTA GCCGTAAGTG GCGAGAAATT
GCCGCCCGCC ATGCCATTTT GCCGCTTCCA GTTCCGGCGC CGCTTGGACC TGTGTTGACC
GAGCCAAAGC CGCATTTATT TAACAATGTC ACTAAAGTAT CGAGTGAACT TTGGGCTGCG
GGAGAAGGGC AGGCAAAGCG TATACTTTCA GCATTTATTC AGCAGAAAGT ACAGGATTAT
AAGCAAGATA GGGATTTCCC CGCCATCGAT GGCACCAGTT CAATTTCACC TTATCTGGCC
ATTGGCGTCG TTAGCCCAAG ACAATGCGTT GCCGCGTTGC TGCATGACTT CCCCGAGGTG
ATTGTCGACG ATACTAGCCC AGCTCGTACT TGGTTAAATG AGCTTACCTG GCGTGAGTTT
TATCGTCATT TGCTGGTGGC ATTTCCTGAC TTATCTAAGA ATTATAATTT CAATAGACAA
GCCGACCATG TGCAGTGGCG TAACAATCAG CAGGAGTTTG CCGCTTGGTG TGAAGGTCGT
ACAGGCTATC CGATTGTCGA TGCGGCAATG CGCCAGCTCA ATCAAACGGG TTGGATGCAC
AATCGTTTGC GTATGGTGGT GGCGAGTTTC CTGACGAAAC ATCTACTGAT TGATTGGCGT
TGGGGCGAGC GTAATTTCCG TCAAAAGCTT ATCGATGGTG ACTTAGCCGC GAATAATGGC
GGCTGGCAGT GGTCCGCCGG TTGTGGCTGT GATGCCCAGC CTTATTTTCG CATTTTTAAT
CCTATGAGCC AGAGTGAAAA GTTTGATCCA GATGGCAGCT TCATCCGTAA GTACTTACCA
GAGCTCGCAT CTTGGGGAAT TAAGCAATTA CATCAACCCA GTACAGCGCA GACACCGTCC
TTGTTTGACC AGCCGTTATT CACTAAAACG GCTTATCCGA GTGCGATTGT CGAGCACAGT
GCAGCAAGAG CAAGGGCATT AACCGTATTA GGCGTATTGA AAAAGGCCGC GGCCCAATAA
|
|---|
| Protein sequence | MTSVNDSMPV DSMRIEVQGN NALMWFRQDL RLADNQALSA ACDWARENGV ALKAIYIATP
TQWQRHDVAP IQLDFIERHI NLLAQGLASL GITFELIQLD TFADVPAFIS DYCQQQGISR
VFAGSEPEIN EQQRDQACIQ AGIPLVLTEE HCLLKPGTVL NLSGDMYKVF TPFSRKWREI
AARHAILPLP VPAPLGPVLT EPKPHLFNNV TKVSSELWAA GEGQAKRILS AFIQQKVQDY
KQDRDFPAID GTSSISPYLA IGVVSPRQCV AALLHDFPEV IVDDTSPART WLNELTWREF
YRHLLVAFPD LSKNYNFNRQ ADHVQWRNNQ QEFAAWCEGR TGYPIVDAAM RQLNQTGWMH
NRLRMVVASF LTKHLLIDWR WGERNFRQKL IDGDLAANNG GWQWSAGCGC DAQPYFRIFN
PMSQSEKFDP DGSFIRKYLP ELASWGIKQL HQPSTAQTPS LFDQPLFTKT AYPSAIVEHS
AARARALTVL GVLKKAAAQ
|
|---|
| |