Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_3182 |
Symbol | |
ID | 5754974 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | - |
Start bp | 3754060 |
End bp | 3755097 |
Gene Length | 1038 bp |
Protein Length | 345 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641289503 |
Product | twitching motility protein |
Protein accession | YP_001555604 |
Protein GI | 160876288 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG2805] Tfp pilus assembly protein, pilus retraction ATPase PilT |
TIGRFAM ID | [TIGR01420] pilus retraction protein PilT |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000300358 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0171368 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAATCA CTGAGTTATT AGCATTTAGT GTAAAACACA AAGCCTCGGA TCTACACCTT TCTGCAGGGA TATCTCCCAT GATCCGTGTC GACGGTGAAG TGAGAAAGAT TAACCTGCCC GCGCTCGATC ACCAAGGCGT ACATAGCCTA GTGTACGACA TAATGAATGA TAAGCAGCGC AAGGACTACG AAGAACATTT AGAAATCGAT TTCTCGTTCG AAGTCCCTAA TCTTGCGCGC TTTCGTGTTA ACGCATTCAA TCAATCCCGT GGTGCTGCGG CCGTATTTCG TACCATTCCT AGCGACATCT TGTCACTTGA GCAATTAGGT GCGCCGGAGA TTTTTAAAAA AATCGCCAGT TTCCCTCGGG GATTAGTCCT AGTGACTGGA CCAACGGGTT CGGGTAAGAG TACCACACTT GCCGCTATGG TGGATTACGT TAACGAAAAT CGACACGATC ACATCTTAAC CATTGAAGAT CCTATCGAAT TCGTTCACCA AAACAAGCAA TGTTTGATTA ACCAGCGTGA AGTTCACCGC CATACCCACA GCTTTAATGC GGCGCTTAGA AGCGCACTGC GTGAAGATCC GGACGTGATT TTAGTTGGTG AGATGCGTGA CCTTGAAACC ATTCGTTTGG CGATGACCGC CGCAGAAACA GGCCACTTAG TGTTTGGTAC TTTGCATACC ACCTCCGCCG CGAAAACCAT TGACCGTGTG GTCGACGTAT TCCCCGCCGG TGAAAAAGAC ATGGTACGCA CTATGTTGTC GGAATCGCTG CAAGCGGTTA TTTCGCAAAC ACTGATTAAA AAGGTTGGTG GAGGCCGTGT CGCCGCCCAT GAAATCATGA TGGGCACTCC CGCTATTCGT AACCTTATTC GTGAAGACAA AGTGGCGCAG ATGTATTCGG CGATTCAAAC CGGTATGGCC CACGGAATGC AGACCTTAGA GCAATGTTTA CAGAACTTAG TCAATCGCGG TCTTATCACC CGTGAAGATG CAATGGCGAA GAGTTCGAAT AAACAAGCGA CATTTTAA
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Protein sequence | MEITELLAFS VKHKASDLHL SAGISPMIRV DGEVRKINLP ALDHQGVHSL VYDIMNDKQR KDYEEHLEID FSFEVPNLAR FRVNAFNQSR GAAAVFRTIP SDILSLEQLG APEIFKKIAS FPRGLVLVTG PTGSGKSTTL AAMVDYVNEN RHDHILTIED PIEFVHQNKQ CLINQREVHR HTHSFNAALR SALREDPDVI LVGEMRDLET IRLAMTAAET GHLVFGTLHT TSAAKTIDRV VDVFPAGEKD MVRTMLSESL QAVISQTLIK KVGGGRVAAH EIMMGTPAIR NLIREDKVAQ MYSAIQTGMA HGMQTLEQCL QNLVNRGLIT REDAMAKSSN KQATF
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