Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_3035 |
Symbol | |
ID | 5754826 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | - |
Start bp | 3603489 |
End bp | 3605975 |
Gene Length | 2487 bp |
Protein Length | 828 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 641289358 |
Product | polysaccharide export protein |
Protein accession | YP_001555460 |
Protein GI | 160876144 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.636336 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.407015 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCTACGAC AAGTCAAAAA ATTCATCATA CTAGGCATAA GTGCCGCGAT TTTGATGGGC GCGCAGGCTA ATGCCATTAC GCCATCTCCG CAGATGATCG AGCAGTTCAA AGCATTACCT AAGTCTGAAC AAGAAAGATT AGCACGCCAA TATGGTGTTG ACCCTTCAAT GATAACTGGG GCCGGTGCTA CAGCCACAGT TGTTGAAAAT CCTACTGTAG TTACCCCACG CGCTACGAAA AATAACGTGG TTGACCAATC GGAAAGCGAC CAGCTAAATC AAGCGACTAA GTCAGAATCT ACGGTTGAGG CAATCGAAGA CAAGAAAGAA AATCAACTCA AACGTTTTGG CTACGACCTC TTTGCGGGTT CACCAAGTAC ATTTGCGCCA GTTAGCGATG TGCCTGTGCC CGCTGAGTAC ATGATTGGTC CTGGTGATAG TCTGAATGTT CAGTTGTTCG GTAAAGAAAA TAACCAATAC ACACTAACAG TAGGTCGTGA TGGTGCCATT CAGTTTCCTA ATTTAGGGCC TATATCCCTG GTTGGTTTGA GCTTTGCTGA GGTGCGTGAA TTATTACAGC AAAAAATTAG CCAAAGCATG ATAGGTATAG AATCAAGTAT CACTATGGGC GAATTACGCT CAATCCGCAT TTTTGTTGCT GGTGATGCCT TCCAACCAGG TTCTTACACT GTTTCAAGTT TATCGACTAT TACTCAAGCC TTATTTATTT CTGGTGGCGT TAACCAAATT GGTAGTTTAC GCAACATTCA AATTAAGCGT GCTGGTAAAA CGGTAGGCCA CTTAGACTTA TATGATCTTC TGCTTCGCGG GGATGCCTCT GGGGATATTC GTTTACAATC TGGTGATGTC GTGTTCATTC CATCTTCAGG TGGTTCAGTG AGTGTGATGG GTGAAGTACG TCGTCCTGCA ATCTATGAGC TTAAAAATAA TGAAACAATG GCGGATGTTA TTCGCATGGC GAGTGGCTTA AACCCTGGAG CTTATCCTAA AGCGAGTACG GTAGAACGCT TCAGTAATGA ATCAGTTAAA ACCGTAATCA GTGTAGATTT AACCGAAAAT GTTGGTTTAA ACACCTTAGT TAAAAATGGT GATCTCCTAA ACGTTAGATC AGCCTCAAGC CGTATCGATA ATGCGATTAC TGTCGCTGGT GCTGTAGTTC GTCCTGGTAA ATATCAATGG ACTAAAGGTT TGACGGTTGC TGATTTACTT CCTTCAATTT GGGGAGACCT CACCATCTCT GCTGATTTGG ATTACGCGTT ACTTGTTCGT GAAATTAACC AGCGCGGCGA TATTCAAGTT GAGCGTATTG CCCTCGGACG AGCAATAGGT GAACCTAAAT CACACTACAA TCCTCAATTA AATCCGCGTG ATTCAATAAT TGTGTTTGAT TATGCAGACC GCGAAGCGCT ACTAAAACCA ATAATTCAGA AGCTGAGAGA GCAAAGTCGT TTTGGAGATG CTGCTAAGCT AGTTAACATT AATGGTAATG TGCGTTTTCC TGGCCAATAC CCAATTACTA TTAATGCAGA TATCAAAGAG TTACTGATCG CGGCGGGTGG ATTAGAGGAA GGTGCTTATA CACTTGCGGC AGAATTAACT CGTCAAAATG TTTCTGAGCA AAATGGGGTG TCTATTGAGC ATGTTCAGCT AAGTTTAGAC CAGGTAATGC AAAATGATCC TGCTGCAAAT ATTAAGCTAC AAAGCCGCGA TATTCTAACT GTTCGTACCC TTCCAGATTG GCAGGAGAAT CGTTGGGTCA CCATTAAAGG GGAAGTGAAG TTCCCCGGTA CTTACAGTAT CCAACGTGGT GAAAGCTTAA AGGATGTTCT TGCTCGTGCA GGCGGATTAA CGAGTGATGC AGCGCCACGC AGTGCGGTAT TTTTACGCAA ATCAGTAAAA GATAAAGAGC AGCTTGAGTT ATCAAAACTT GCTGATGAAT TGCGTCGTGA GATTGCCGCA AAAGCGTTGA CGAAAGATAC ACCAACCATT GGCTATAACG ATGCGCAGCT GATGTTAAAT CAGCTTGAAA ATGTTAAAAC TGTCGGCCGA TTAGTTGTTG ATGTCAATGC CATTGAACTG GGGATAGATA GTGCTAACCT TATGCTTGAA GATGAGGATG CCTTGTACAT TCCTGCGACT AATCAAACCG TGTCAGTCAT GGGCCAAGTA CAGCACCCAA GTACACACAG ATATAAGCAA GGTTTAACAT TCGACCAATA TTTAGCATTA TCTGGTGGCG CACGTAAACG TGCCGATGAA TCTCGCTCAT ATATTCTAAG GGCTGATGGC TCGGTCGAAA TGCCAAACAC ATCCTTCTGG TTTAGTGGTG GCAGTGCTAT AGAACCTGGC GATACTATAG TTGTGCCATT AGATACTGAA TATAAAGACA ACTTAACGCT TTGGAGTCAA GTCACTGGCA TTATCTACAA CACCGCAGTT GCAGTGTCTG TAATATCTGG GCTGTAG
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Protein sequence | MLRQVKKFII LGISAAILMG AQANAITPSP QMIEQFKALP KSEQERLARQ YGVDPSMITG AGATATVVEN PTVVTPRATK NNVVDQSESD QLNQATKSES TVEAIEDKKE NQLKRFGYDL FAGSPSTFAP VSDVPVPAEY MIGPGDSLNV QLFGKENNQY TLTVGRDGAI QFPNLGPISL VGLSFAEVRE LLQQKISQSM IGIESSITMG ELRSIRIFVA GDAFQPGSYT VSSLSTITQA LFISGGVNQI GSLRNIQIKR AGKTVGHLDL YDLLLRGDAS GDIRLQSGDV VFIPSSGGSV SVMGEVRRPA IYELKNNETM ADVIRMASGL NPGAYPKAST VERFSNESVK TVISVDLTEN VGLNTLVKNG DLLNVRSASS RIDNAITVAG AVVRPGKYQW TKGLTVADLL PSIWGDLTIS ADLDYALLVR EINQRGDIQV ERIALGRAIG EPKSHYNPQL NPRDSIIVFD YADREALLKP IIQKLREQSR FGDAAKLVNI NGNVRFPGQY PITINADIKE LLIAAGGLEE GAYTLAAELT RQNVSEQNGV SIEHVQLSLD QVMQNDPAAN IKLQSRDILT VRTLPDWQEN RWVTIKGEVK FPGTYSIQRG ESLKDVLARA GGLTSDAAPR SAVFLRKSVK DKEQLELSKL ADELRREIAA KALTKDTPTI GYNDAQLMLN QLENVKTVGR LVVDVNAIEL GIDSANLMLE DEDALYIPAT NQTVSVMGQV QHPSTHRYKQ GLTFDQYLAL SGGARKRADE SRSYILRADG SVEMPNTSFW FSGGSAIEPG DTIVVPLDTE YKDNLTLWSQ VTGIIYNTAV AVSVISGL
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