| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_2841 |
|---|
| Symbol | |
|---|
| ID | 5754619 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009997 |
|---|
| Strand | + |
|---|
| Start bp | 3383654 |
|---|
| End bp | 3385780 |
|---|
| Gene Length | 2127 bp |
|---|
| Protein Length | 708 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 641289152 |
|---|
| Product | FAD dependent oxidoreductase |
|---|
| Protein accession | YP_001555267 |
|---|
| Protein GI | 160875951 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
|---|
| TIGRFAM ID | [TIGR03197] tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.0000153917 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 1 |
|---|
| Fosmid unclonability p-value | 0.000123138 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | TTGACTGCAG AGCCCAATAA ACCTTGCCAA ATTAAGCGTG ATTACCAGCA ATTAATCAAC
CTTTATCCCG CAACAGCTCA CACTGATGCA CACTATCTCA GCAAGTTGAG CATTTATCAG
CAGCGGGTAT TTGAGGCTCA TTCACAGCAA AAACTCTTAA TATTAGGCCA AATTGGTTTA
GGTAACGGGC TTGAACTCTT ATCTTGGTGG CGCACTCAGG CGAACCCTAG CCAACGTTTA
CTCCTTAAGG TGTTCGAACC CAATCCGATT AATGCGTACG AACTTAAATC ACTTTGGGAT
CAATCACTCA CTCTTGTGAA AGAAACCCCA TTCGAGCCAC ATCTTGAATC AAAGCAAGCG
TCAGCGTTGG AGTGTAAATC TAAGCTCAGC CAGCTTGCTC AAACCTTACT CGATGCTGAG
CCGACGGCTA TTATAGGTTG CCAGAGATTA ATTTTTGATG ACGGTCGTAC CACTATCGAC
CTGCACTTTG GTGATATTCA AACCCAGCTC AGTTCACTCA CCCATTCGCC AATGCATCCG
GTTCAACACT GGTTGATATT GCCCCATCTG CTACAGGCGC TATATCATCA AAGCCAATGG
CAGATGGCAA AACTCAGTGA CGATAGCGCA ACCATTGCCA CGATTGGATT AAGCGAATCA
AGCGAATTAA GCGAAACAAC AGTCAACCGT TTCCAAGCCT GTGGCTTTAC TGTGAGCGAT
ATCAATGAAC TTGGTACCAA AGCTCTGGGT ATCCATCAAC CAGTCACACT GATTAACCAC
CAGCCTGACG CCGTACTGCT ACACGAGCGC CAAGTCTTAC GTCAGCAAGA CGCTAAAGCC
TATGCTTTTA ATCCTATGGC TGCAATCTTA TCCTCGCCGA CGCAAAGCTC GATTGCCATT
ATAGGCGGCG GCTTAGCCTC GGCGCATTTG ACGCTGTCTT TGGCTGAGCG CGGCCAAGGT
GCACAGGTAT TTTGTAAAGA TGCCGAGCTA GGCCAAGGCG CATCGGGCAA TCGCCAAGGA
GCCATTTATC CACTGCTGAC AACGGAAAAT GATGAATTAA GCCGCTTCTT CCAACAGGCA
TTTTTATTTA GCCGACGTCG AGTGCAGGCG CTGACATCCG CCCCCGCCGA CAATCAGACG
CCGATTTCCC ATAATTTTTG CGGCGTATTG CAAACTGCCC ACGATGAACG CAGCCAGTTA
CGACTCGATA AAATCATTCA AGGCCAACCC TGGCCAAGTG AAATCGCCTA CGCCGTCGAT
GCTGAGCAAG CCAATGCAAT TGCCAAGATC AATCTCGATA AACCAGGTTT TTTTTATCCC
TTAGGTGGCT GGGTTTGCCC ATTTGAATAT GCCGACGCTG CGATACAAAA AGCGATGCAA
CTGGCCGATG TCAGCGTCTC GCTCAATACT GACATCCTTG CCATTGAACG CCAAGCCGAT
GGCTGGGTTT TGTTGACTGA AAAGGAACGT TTCGGGCCCT TTGCACAACT TGTACTCGCC
AATGGCGCTG AATTGACACA ATTTGATGCC AGTAACAAAT TACAAATTAG CCCCTTTCGC
GGTCAAGTCA GCCATGTGCC CGCTCAATTT CAATTGAGTC AGCTCGCAAC TGTGCTGTGC
GCCAACGGTT ATTTAACGCC AAGTCACCAA GGACTCCACT GCCTTGGCGC GAGTTACGTT
AAAGAACCCG AGCATTTAGA CTTTTGCTCG CAGGAACAAC AAGAAAACCT CATGAAAATG
CACGAGAGTT ATCCGAACCA AAGCTGGCTT GAAGATATCG ACATGAGTGG CAACAATGCC
CGCATCGGCG TACGTATGGT GACGCGGGAT CACTTCCCTA TGATGGGCTG CGCGCCCGAT
GTGGCGAAAA TCCTTGAGGA TTATGAGCAA CATCAACTCA CTAAAGAAAG TCGCCACTAC
TGGCAAACCA CACCAGCGCC GGTGCATCAA GGACTGTATA TTCTTGGTGG GTTAGGCTCA
CGGGGACTCA GTTCTGGGCC ACTGGCCGCC GAATGTCTCG CGGCGCAGCT TTGCGGCGAA
CCAATACCGC TCGATAAAGA AACCCTGTGT AAACTCAACC CCAATCGCAT GTGGCTGCGA
AAATTGCTCA AGGGTAAAGC GCTCTAG
|
|---|
| Protein sequence | MTAEPNKPCQ IKRDYQQLIN LYPATAHTDA HYLSKLSIYQ QRVFEAHSQQ KLLILGQIGL
GNGLELLSWW RTQANPSQRL LLKVFEPNPI NAYELKSLWD QSLTLVKETP FEPHLESKQA
SALECKSKLS QLAQTLLDAE PTAIIGCQRL IFDDGRTTID LHFGDIQTQL SSLTHSPMHP
VQHWLILPHL LQALYHQSQW QMAKLSDDSA TIATIGLSES SELSETTVNR FQACGFTVSD
INELGTKALG IHQPVTLINH QPDAVLLHER QVLRQQDAKA YAFNPMAAIL SSPTQSSIAI
IGGGLASAHL TLSLAERGQG AQVFCKDAEL GQGASGNRQG AIYPLLTTEN DELSRFFQQA
FLFSRRRVQA LTSAPADNQT PISHNFCGVL QTAHDERSQL RLDKIIQGQP WPSEIAYAVD
AEQANAIAKI NLDKPGFFYP LGGWVCPFEY ADAAIQKAMQ LADVSVSLNT DILAIERQAD
GWVLLTEKER FGPFAQLVLA NGAELTQFDA SNKLQISPFR GQVSHVPAQF QLSQLATVLC
ANGYLTPSHQ GLHCLGASYV KEPEHLDFCS QEQQENLMKM HESYPNQSWL EDIDMSGNNA
RIGVRMVTRD HFPMMGCAPD VAKILEDYEQ HQLTKESRHY WQTTPAPVHQ GLYILGGLGS
RGLSSGPLAA ECLAAQLCGE PIPLDKETLC KLNPNRMWLR KLLKGKAL
|
|---|
| |