Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_2790 |
Symbol | |
ID | 5754568 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | - |
Start bp | 3322885 |
End bp | 3323901 |
Gene Length | 1017 bp |
Protein Length | 338 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641289102 |
Product | putative periplasmic protease |
Protein accession | YP_001555217 |
Protein GI | 160875901 |
COG category | [O] Posttranslational modification, protein turnover, chaperones [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
TIGRFAM ID | [TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000021118 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGAATTTT TATACGAGTA TGGAATGTTT TTGGCGAAAG CCGTCACGAT AGTGGTCGCA ATCGTTGCGG TTATTATTGT GGTGTTGGCT TCCACTGTTA AACATAAGTC AGATAAGGGC GAGCTGAGGA TCACTAACCT GTCTGAAGAG TTAGAAGAAC TGAAGCATGG CTTAAAAGAA GAACTCCTTT CAAAGAAGCA ATTCAAAGCC TATGAGAAGC AATTAAAGGC CGAAGAAAAG GCGAAAGACA AAGCTGCTGA TGATGCCAGC ACGGGCAAAG TGTTCGTGAT CGATTTCAAG GGCAGTATCG ATGCCGCTGA GGTTGCGTCA CTGCGCGAAG AAATCAGTGC CATTTTAGCT ATCGCGGAAA AAGGCGATGA AGTGGTTGTT AATGTCGAGA GTGGTGGTGG TATGGTGCAT GGCTATGGTT TAGCCTCCAG CCAGCTTGAC CGTTTACGCC AAGCCGATAT TCCGCTAACA GTCTGCGTTG ATAAAGTGGC TGCCAGTGGC GGTTATATGA TGGCCTGTGT TGCGAATAAA ATTTATGCGG CGCCTTTTGC AATTGTTGGT TCAATTGGTG TTGTTGCTCA ACTGCCGAAC TTTAATCGTT TGCTGAAAAA GCATGAAATC GATTATGAGC AACATACGGC CGGTAATTTT AAACGTACCT TGACAGTGTT TGGTGAAAAC TCCGATGAGG GAAGACAGAA GTTTCAAGAA GAACTCGAAG AAACCCACGT CTTATTCAAA GCGTTTGTCG GTAAATATCG CCCTGAGTTG GATTTAGTGA AAGTAGCCAC GGGCGAGCAT TGGTATGGCC AGCAAGCCAT TGAATTAGGG TTAGTTGATG CGATTTCGAC CAGTGATGAT GTGATTATGT CACTTGCCGC AGAGCGCACT GTGTATAAGA TGCGTTATCA GGTGAGAAAG AAACTTGCCG ATAAAATTGC CCATGGCGCA TCTTTATCTG TGAATGCTAT TTTTAATCGT CTTATCGAGA AAAACCGTCC AATGTAA
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Protein sequence | MEFLYEYGMF LAKAVTIVVA IVAVIIVVLA STVKHKSDKG ELRITNLSEE LEELKHGLKE ELLSKKQFKA YEKQLKAEEK AKDKAADDAS TGKVFVIDFK GSIDAAEVAS LREEISAILA IAEKGDEVVV NVESGGGMVH GYGLASSQLD RLRQADIPLT VCVDKVAASG GYMMACVANK IYAAPFAIVG SIGVVAQLPN FNRLLKKHEI DYEQHTAGNF KRTLTVFGEN SDEGRQKFQE ELEETHVLFK AFVGKYRPEL DLVKVATGEH WYGQQAIELG LVDAISTSDD VIMSLAAERT VYKMRYQVRK KLADKIAHGA SLSVNAIFNR LIEKNRPM
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