| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_2721 |
|---|
| Symbol | |
|---|
| ID | 5754494 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009997 |
|---|
| Strand | - |
|---|
| Start bp | 3227042 |
|---|
| End bp | 3228754 |
|---|
| Gene Length | 1713 bp |
|---|
| Protein Length | 570 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 641289029 |
|---|
| Product | AMP-binding domain protein |
|---|
| Protein accession | YP_001555149 |
|---|
| Protein GI | 160875833 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.443793 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.43387 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCAGTTC CAACAAGCCA AGTTATCAGT CCGCTCAACG TCAGCGAGTT TCATGGTGTG
CGATCACCGA AACTCGTTGA GAAAACCATA GGTCAGTATC TTGATGAGAT TGCGGCAACG
TATCCCGACC AATTAGCCGT TGTCGTACAT CATCAACATA TCCGCTGGAA TTACCACCAA
TATCTCGCTC AAATCGAGGC GCTCGCCACA GGATTATTAA AACTCGGTAT TAAGTCCGGC
GATAGAGTGG GCATTTGGTC ACCCAACAAT ATTGAATGGT GTTTAACCCA ATATGCGACC
GCTAAAATTG GCGCCATCAT GGTGTGTATT AACCCCGCTT ATCGGCCTGA AGAGTTGCAA
TATGCGCTGA GTAACGTGGG TTGCCGCGCG GTAATTTGTG CCGACAAGTT TAAATCCAGC
AATTACCTCG AAATGCTATA CGAATTGGCG CCTGAGCTAA CTTCTTGCCC TGCTGGTCAA
TTACAGGCGA AGGCTGTTCC TGAGCTCGAG TTTGTGATCC GTATGGGCGC TGAAAAATCC
GTCGGCATGT TGAATTTTGA TGATCTGCTC GTCGATGTGA CCGCCGATGA CAAGGCGGCA
CTCGAGAGTA TCGGCAAAGC ATTAAGCCCG TATGATTCGA TTAATATCCA GTTTACCTCT
GGCACGACGG GTAGCCCGAA AGGTGCGACC TTATCCCACC ATAACATTTT GAATAATGGC
TATTTAGTCG CAGAGGCGAT GAAGTTTACC TGCCACGATA AACTCTGTAT TCCTGTGCCC
TTATACCATT GTTTTGGCAT GGTACTCGGC AGTTTAGTCT GCTTAGCCAA AGGCGCTGCG
GCTGTCTTCC CCGGCGAATC CTTTGATCCC TTGACGACAT TGCAAGTGAT TGAGCAAGAG
GGGTGCACCG CTTTACATGG CGTACCGACC ATGTTTATTG CCGAGCTTGA GCATCCTGAA
TTTACGCGTT TTGATTTGAG TTCTTTACGA ACCGGCGTGA TGGCGGGGGC AACTTGCCCA
GAAGAAGTGA TGCGCCGAGT ACAAAATCTC ATGTATATGA AGGAAGTACT GATTGGTTAT
GGTCAGACTG AGTGCAGTCC GCTCAATCAT ATTACTGAAA TCGATTCGCC GGTTGAGAAA
CGTGTGCTCA CCGTTGGCCG AGCTTTGCCC CATACCGAAG TGAAAATAGT CGACGAATTT
GGTGAAGTGT TGCCAGTTAA TCAACCCGGT GAAGTCTGTA GTCGGGGATA TTGCATAATG
CAGTGCTATT GGAACGATCC CGAAAAAACG GCGGCGACCA TAGACAGTGC GGGTTGGCTA
CATTCGGGCG ATATCGGCCA AATGGATGAG CAAGGTTATG TGCAAATTGT GGGTCGCATT
AAAGATATGA TCATTCGTGG TGGCGAGAAT ATCTATCCCC GTGAGATTGA AGAGAAACTT
TACACCCATA AAGATGTGCA GGATGCGGCG GTTTTTGGTG TTCAAAGCGA TAAATACGGG
GAGGAAGTGT GTGCTTGGAT TAAAGTCCGC TCAGGCTCCG CGATTACCGA GGACGATATT
CGTCATTTTC TTACCGAGAA GTTTGCCTAC TTTAAAGTAC CGCGTTACAT CAAGTTTGTG
GATCAGTATC CAATGACAGT AACGGGGAAA ATTCAGAAAT TCAAAATGCG TGAGCTGATG
TATCAAGAGT TATATGAAGA TATTAATGCT TAA
|
|---|
| Protein sequence | MSVPTSQVIS PLNVSEFHGV RSPKLVEKTI GQYLDEIAAT YPDQLAVVVH HQHIRWNYHQ
YLAQIEALAT GLLKLGIKSG DRVGIWSPNN IEWCLTQYAT AKIGAIMVCI NPAYRPEELQ
YALSNVGCRA VICADKFKSS NYLEMLYELA PELTSCPAGQ LQAKAVPELE FVIRMGAEKS
VGMLNFDDLL VDVTADDKAA LESIGKALSP YDSINIQFTS GTTGSPKGAT LSHHNILNNG
YLVAEAMKFT CHDKLCIPVP LYHCFGMVLG SLVCLAKGAA AVFPGESFDP LTTLQVIEQE
GCTALHGVPT MFIAELEHPE FTRFDLSSLR TGVMAGATCP EEVMRRVQNL MYMKEVLIGY
GQTECSPLNH ITEIDSPVEK RVLTVGRALP HTEVKIVDEF GEVLPVNQPG EVCSRGYCIM
QCYWNDPEKT AATIDSAGWL HSGDIGQMDE QGYVQIVGRI KDMIIRGGEN IYPREIEEKL
YTHKDVQDAA VFGVQSDKYG EEVCAWIKVR SGSAITEDDI RHFLTEKFAY FKVPRYIKFV
DQYPMTVTGK IQKFKMRELM YQELYEDINA
|
|---|
| |