Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_2685 |
Symbol | rlmL |
ID | 5754452 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | - |
Start bp | 3188540 |
End bp | 3190669 |
Gene Length | 2130 bp |
Protein Length | 709 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641288987 |
Product | 23S rRNA m(2)G2445 methyltransferase |
Protein accession | YP_001555113 |
Protein GI | 160875797 |
COG category | [L] Replication, recombination and repair [R] General function prediction only |
COG ID | [COG0116] Predicted N6-adenine-specific DNA methylase [COG1092] Predicted SAM-dependent methyltransferases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.379022 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTAATT TTTTTGCCGC CGCCCCTAAG GGCTTTGAAT ATAGCTTAGC CCAAGAGCTG ACAGAATTTG GTGCGACTGA AGTAAAAGAG AGTGTTGCTG GTGTGTATTT CACGGCCTCC TTAGCTTTAG CGTATCGCAT TACTTTATGG ACACGCTTAG CCAGCCGCAT TGTGCTGGTT ATCTATAAAG GAAGCTGCGA GTCGGCAGAA CAACTCTATA ATGCAGCTTA TTGTGTTGAT TGGCCGGCAC ACTTTTCCAA TAAAAGCACT TTTAGTATCG ATTTCCATGG TACGGGTGGT TTTCTTAATA ATACCCAGTT TGGCGCCTTG AAGATTAAGG ATGCGATTGT CGATCGTTTC CGTGACGATG ATATTGAGCG TCCGAATGTG TCTCGCGTTG ATGCTGAATT TAAAGTCGAT GCGCATTTCC GTAATGGCGT GATCACGATA GCGATGAACT TCTCGGGTCC ATCGCTTCAT CAACGTGGCT ATCGTTCGAC CACAGGTGAA GCGCCATTGA AGGAAAACTT AGCCGCCAAC ATGCTCGTAC GCAGTGGCTG GCAAGCGTCG CCTTCAACCT TGCTCGATCC TTTCTGTGGT AGCGGTACAG TGCTGATTGA AGCGGCGTTA ATGGCGGCTG ATATTGCCCC TGGTCTGCAA CGTAGTCGTT TTGGTTTTGA ACATTGGCGT CGCCATGATA AAGCCGTGTG GCAAGAAATC GTTGAAGAAG CGAAAGCGCG TGCTTCATTA GGCGTGAAAC GTTGCGAGAT TAAATTCTAC GGTTCTGATA TCGATTCGCG CTTAGTCGCG TTAGCGAAAC GTAACGCCGA AAATGCCGGT GTACTGGAGT TAATCGAGTT TAAAGTTGCG GATGCTTTAA CGATAGCGCC GCCTGCGGAA AGCGGCTATT TGATCACCAA CCCACCTTAT GGTGAGCGTT TAGGTAATGT GTCTGAGTTA TTGCAGCTTT ACTATCAGCT GGGCGACAAG TTTAAGAAAG AGTTTGGCGG CTGGAAAGTG GCCATGCTGT GTAGTGATAT CGAACTGGTG TCATCGCTAA AGCTTAAAGC CGATAAACAA ATGAAGATGT TTAACGGCGC ACTTGAATGT GCTTTTAACA TCTACACCTT ACATGCCAAC AGTACTCGCC GTGATACGCC AGTGCTGCCA GATGGCGTCG ACATTGCTGA TATTGCCCCA GCTTTTGCTA ACCGCATTAA GAAGAATGCC AAGTTATTAG AGAAATGGGC GAAGAAAGAA GGCATCGACA GCTATCGTAT TTACGATGCC GATATTCCTG AATATAACGT CGCAGTAGAT AAGTATTTAG ATTACGTGAT TATTCAAGAG TATATGGCGC CAGCGACCAT ACCTGAAGCC GTGACTAAAC GTCGTTTAAG TGATGTGTTA TTAGCACTGC CATCGGCCAT TGGCATCAAC CCTAACAAGA TGATCATGAA GACGCGTGAG CGTCAAAAGG GCACGAGTCA ATATCAAAAG CTGGATGAGC GTAAGTTAGA GCTTATCACT ACCGAATATG GCGCTAAGTT CAAGTTGAAC TTAACCGGTT ATTTGGATAC AGGTTTGTTC CTCGATCACA GATTGACACG TCGTTTAGTC GGTCAAAAAT CTAAAGGTCG CCGCGTACTG AACTTGTTCT CTTATACAGG TTCTGCTTCT GTGCATGCAG CGCTTGGCGG TGCTAAGTCG GTAACGACAG TTGATATGTC TAATACCTAT ATCGCTTGGG CGAAGGACAA CTTTGCGCTC AATGGCCTGC AAGGTAAGCA GTATGAGTTT GTTCAATCTG ACTGCATGCA GTGGATTAGG GATTGTAATG AACAGTACGA TCTGATTTTT ATCGATCCGC CAACCTTCTC AAATTCTAAG CGCATGGAAG ATTCGTTTGA TGTGCAACGG GATCATGTGA ACTTACTGGC ATCCTTAGTA AAACTGCTCA GCCCAACGGG TGAGCTAGTG TTCTCTAACA ATAAACGTAA GTTTAAGATG GACATAGAGA CGCTGACAAA GATGAACATT AATGTGACGA ACATTGATGA TGTGACTTTG CCTATGGACT ACAAACGTAA TCCACATATC CATAATACCT GGCTTATCAC CCATGCCTGA
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Protein sequence | MLNFFAAAPK GFEYSLAQEL TEFGATEVKE SVAGVYFTAS LALAYRITLW TRLASRIVLV IYKGSCESAE QLYNAAYCVD WPAHFSNKST FSIDFHGTGG FLNNTQFGAL KIKDAIVDRF RDDDIERPNV SRVDAEFKVD AHFRNGVITI AMNFSGPSLH QRGYRSTTGE APLKENLAAN MLVRSGWQAS PSTLLDPFCG SGTVLIEAAL MAADIAPGLQ RSRFGFEHWR RHDKAVWQEI VEEAKARASL GVKRCEIKFY GSDIDSRLVA LAKRNAENAG VLELIEFKVA DALTIAPPAE SGYLITNPPY GERLGNVSEL LQLYYQLGDK FKKEFGGWKV AMLCSDIELV SSLKLKADKQ MKMFNGALEC AFNIYTLHAN STRRDTPVLP DGVDIADIAP AFANRIKKNA KLLEKWAKKE GIDSYRIYDA DIPEYNVAVD KYLDYVIIQE YMAPATIPEA VTKRRLSDVL LALPSAIGIN PNKMIMKTRE RQKGTSQYQK LDERKLELIT TEYGAKFKLN LTGYLDTGLF LDHRLTRRLV GQKSKGRRVL NLFSYTGSAS VHAALGGAKS VTTVDMSNTY IAWAKDNFAL NGLQGKQYEF VQSDCMQWIR DCNEQYDLIF IDPPTFSNSK RMEDSFDVQR DHVNLLASLV KLLSPTGELV FSNNKRKFKM DIETLTKMNI NVTNIDDVTL PMDYKRNPHI HNTWLITHA
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