Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_2634 |
Symbol | |
ID | 5754393 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | + |
Start bp | 3120600 |
End bp | 3121664 |
Gene Length | 1065 bp |
Protein Length | 354 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641288928 |
Product | RND family efflux transporter MFP subunit |
Protein accession | YP_001555062 |
Protein GI | 160875746 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.182724 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.987528 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGAAAAGT CAAACATTGC TAAATTCGCC CTACCCCTGC TAATGATTTC AATGCTAGCA GCCTGTGGTA AGGAAGAAGT GGCTAAAAAA GAAGAAAAAT ATGCCATTCC CGTCGAAACC ACCACAGTGA TGCAAGGAAA CGTTTCATCT TTCTACAGCA CAACAGCCAC CTTAGAAGCA CCTCAAGAAG CCAATGTCGT CAGCCGCATT TCTGGACTCA TTGAATCACT AGCCGTTGAA GAAGGTGACC GCGTGCAGAA GGGGCAAGTG CTCGCCGTTA TCGATGCCAA AAGACAGCAA TACGATTTAG ACCGCTCAGA AGCCGAAGTT AAAATCATTG AGCAGGAATT GAATCGTCTG AAGAAAATGG GCAACAAAGA ATTTATCAGC GCTGATTCGA TGGCCAAACT TGAATATAAC TTGCAAGCCG CCATCGCTAA GAAAGATCTT GCCGAGCTAC AAGTTAGAGA AAGCCGCGTA CTGTCCCCTA TTAGCGGTGT CGTCGCTAAA CGTTATGTGA AAGCAGGCAA CATGGCGAAG GAATTTGGCG ACTTGTTTTA TATCGTTAAT CAAGATGAAC TCCACGGTAT AGTCCATCTG CCAGAGCAAC AACTTGCCAG CTTAAAACTC GGCCAAGAAG CACAAGTGTT CAGCAATCAA CAAAGTAAAA TTGCTATCCA TGCCAAAGTG CTGCGGATAA GCCCGATTGT TGACCCACAA AGCGGCACGT TTAAAGTGAC ATTAGCCGTA CCGAATCAAG AGGCGCGCCT AAAAGCAGGG ATGTTTACCC GTGTTGAGCT TAAGTATGAC ACCCATGAAA ACGTGATTAC CGTTCCCTAT AGCGCCCTGA TTAATCAAGA TAACAGGCAA GCTCTGTATG TTATCGATGG CACTAGTGCT AATCGCCGTG AAGTCGAAAT TGGCTACCGT GAAGGTGACT CTGTAGAAGT GATTGCAGGC ATTAACCCAG GTGAACAAGT CGTGACCCGT GGCCAGCAAA ACTTGAAAGA CCAATCCTTA GTCGAAGTGA TCACCCCACT CGATCTTGCT TCCGCTAAGA ACTGA
|
Protein sequence | MEKSNIAKFA LPLLMISMLA ACGKEEVAKK EEKYAIPVET TTVMQGNVSS FYSTTATLEA PQEANVVSRI SGLIESLAVE EGDRVQKGQV LAVIDAKRQQ YDLDRSEAEV KIIEQELNRL KKMGNKEFIS ADSMAKLEYN LQAAIAKKDL AELQVRESRV LSPISGVVAK RYVKAGNMAK EFGDLFYIVN QDELHGIVHL PEQQLASLKL GQEAQVFSNQ QSKIAIHAKV LRISPIVDPQ SGTFKVTLAV PNQEARLKAG MFTRVELKYD THENVITVPY SALINQDNRQ ALYVIDGTSA NRREVEIGYR EGDSVEVIAG INPGEQVVTR GQQNLKDQSL VEVITPLDLA SAKN
|
| |