| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_2607 |
|---|
| Symbol | cysB |
|---|
| ID | 5754366 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009997 |
|---|
| Strand | - |
|---|
| Start bp | 3086847 |
|---|
| End bp | 3087830 |
|---|
| Gene Length | 984 bp |
|---|
| Protein Length | 327 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 641288901 |
|---|
| Product | transcriptional regulator CysB |
|---|
| Protein accession | YP_001555035 |
|---|
| Protein GI | 160875719 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.00558949 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 2 |
|---|
| Fosmid unclonability p-value | 0.000632462 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTGC AACAACTCAG GTATATTGCT GAGGTCGTAA AACATAACCT CAATGTATCG
GCGACAGCTG AAAACTTGTA TACCTCTCAA CCTGGGATCA GTAAACAAGT TCGCATGCTT
GAAGATGAGT TGGGGATCCA AATATTTGGT CGTAGCGGTA AGCACTTAAC CCATGTCACA
CCTGCGGGTT TGCAAGTGAT CAGCATTGCC AATGATATCT TGGGTAAAGT CGAGAGCATT
AAAAAAGTTT CTGAGGAATA TACTAAGCCC GATCAAGGCG AGTTAAATAT TTCCACGACA
GACACTCAGG CGCGCTATGC ATTGCCGACG ATCATTCGGC AGTTTATTGA TCGCTACCCT
AAAGTGAACT TGCATATGCA TCAGGGGACG CCGTCGCAGA TCAGCGAACA GGCCGCTCGC
GGTGATGCGG ATTTCGCCAT CGCGACTGAA GCAATGCATT TGTATTCCGA CTTGATTATG
TTGCCTTGTT ATCATTGGAA TCGCTCCATC GTCGTTCCTA AAGATCATCC TCTTGCGACC
CGTAGCCCAA ATAATTTGAT TAGCATCGAA GATTTAGCGC GCTTCCCCTT AGTGACTTAT
GTCTTTGGTT TTGACCGTGC TTCTGAAATT GAGAAAGCGT TCAATCGCGC CAATTTAGAG
CCGCGTGTTG TTTTTAGTGC GACCAGCGCC GATGTGTTGA AAACCTATGT CCGTTTAGGA
TTAGGTGTGG GTGTTATTGC CTCTATGGCG ATTGACCCTA ATGTCGATAA AGATTTAGTT
GCGATTGATG CTGGCCATTT GTTTGCCCAC AGTACGACTA AAATTGGCTT CAGGAAGGGT
AGCTTCTTAC GCAGTTATAT GTATGATTTT ATTCAGCACT TTGCGCCGCA TTTAACCCGT
GACGTGGTGG AGAAAGCTGT CGCCTTACGG GATCAACAGC TTATTGATGA AATGTTTGCC
GATAAAAATC TGCCAATGCG TTAA
|
|---|
| Protein sequence | MKLQQLRYIA EVVKHNLNVS ATAENLYTSQ PGISKQVRML EDELGIQIFG RSGKHLTHVT
PAGLQVISIA NDILGKVESI KKVSEEYTKP DQGELNISTT DTQARYALPT IIRQFIDRYP
KVNLHMHQGT PSQISEQAAR GDADFAIATE AMHLYSDLIM LPCYHWNRSI VVPKDHPLAT
RSPNNLISIE DLARFPLVTY VFGFDRASEI EKAFNRANLE PRVVFSATSA DVLKTYVRLG
LGVGVIASMA IDPNVDKDLV AIDAGHLFAH STTKIGFRKG SFLRSYMYDF IQHFAPHLTR
DVVEKAVALR DQQLIDEMFA DKNLPMR
|
|---|
| |