| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_2575 |
|---|
| Symbol | dcd |
|---|
| ID | 5754334 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009997 |
|---|
| Strand | - |
|---|
| Start bp | 3048718 |
|---|
| End bp | 3049299 |
|---|
| Gene Length | 582 bp |
|---|
| Protein Length | 193 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 641288869 |
|---|
| Product | deoxycytidine triphosphate deaminase |
|---|
| Protein accession | YP_001555003 |
|---|
| Protein GI | 160875687 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0717] Deoxycytidine deaminase |
|---|
| TIGRFAM ID | [TIGR02274] deoxycytidine triphosphate deaminase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.109993 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.03889 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCTTAA CCGATATCGA AATTGAACAG GCCCTTGATA ACGGCACTAT CGTAATAGAA
CCTCGCCCAG GCATAGAAGC TATTTCAGGC GTCAGTGTTG ATGTGCGCTT AGGTGGACAG
TTTCGCGTCT TTAAAGATCA TACTGCGCCT TATATCGACT TGAGTGGTCC AAGCGTCGAG
ATGCAAGCTG CGCTTGATCG GGTGATGAGT GAAATTATCG AAATCCCTGA TGGCGAAGCG
TTTTTCCTGC ATCCTGGCGA ATTGGCCTTG GCGGTGACTT ACGAGAGCGT GACGCTGCCC
GCCGATATCG TCGGTTGGCT CGATGGTCGT TCATCATTGG CGCGTTTAGG TCTTATGGTA
CATGTGACTG CGCACCGTAT CGATCCAGGT TGGCAGGGTA AAATCGTGCT CGAGTTCTAT
AACAGCGGCA AGTTACCTTT GGCCCTGCGT CCACGTATGA CCATAGGTGC GCTTAACTTT
GAACGCCTCA ATCATGCGGT TGCACGTCCT TATAACACCC GTAAAAGTGC CAAGTATAAA
GATCAGCAAG AAGCGGTCGC CAGCCGTATC AGTCAGGACT AA
|
|---|
| Protein sequence | MRLTDIEIEQ ALDNGTIVIE PRPGIEAISG VSVDVRLGGQ FRVFKDHTAP YIDLSGPSVE
MQAALDRVMS EIIEIPDGEA FFLHPGELAL AVTYESVTLP ADIVGWLDGR SSLARLGLMV
HVTAHRIDPG WQGKIVLEFY NSGKLPLALR PRMTIGALNF ERLNHAVARP YNTRKSAKYK
DQQEAVASRI SQD
|
|---|
| |