Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_2572 |
Symbol | tmk |
ID | 5754331 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | - |
Start bp | 3046220 |
End bp | 3046846 |
Gene Length | 627 bp |
Protein Length | 208 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641288866 |
Product | thymidylate kinase |
Protein accession | YP_001555000 |
Protein GI | 160875684 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0125] Thymidylate kinase |
TIGRFAM ID | [TIGR00041] thymidylate kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0232881 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0771597 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAGTTT TTGCAAAATT TATCGTTATT GAAGGTTTAG AAGGCGCGGG TAAGTCGAGT GCGATTAACC TTATTCGCGA CTTTATTGAG AAACATACGG GTAAAGCGCC GATCTGCACT CGCGAGCCGG GTGGCACGCC ACTGGCCGAA CGTATCCGTG ATTTGGTCAA AATTGCCGAT GCGACCGATC CCCTGTGTGA CGAGGCCGAG TGTTTACTTA TCTATGCCGC CAGAGCCCAG TTGGTTGCTA ATGTCATTAA GCCCGCGCTT GCGCAGGGTC AATGGGTATT GGGTGACAGA CACAATTTAT CGTCACTGGC CTATCAAGGT GGTGGCAGGG GCTTAATGCC GTTAGTGGAA GCGGTGAGCA CTGCCACCCT TAAAGGCTTT AAACCCGATC TCACCTTGTA CTTAGATTTA GATCCTAAAC TTGGGCTAAC CCGCGCAGCT AAACGCGGTG AGCTTGATAG AATCGAGCAA CAAGCGATTG ATTTCTTTGA ACGGGCTCGC GCGACTTATC TTAAACTTGC CAGCGAAGAT GACAGCATAG TGGTTATCGA TGCGAGTCAA ACCATGGCCG AAGTGCATAA AGATATCTTA GCCGTACTAC AGGCGATGGC ATGGTAG
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Protein sequence | MSVFAKFIVI EGLEGAGKSS AINLIRDFIE KHTGKAPICT REPGGTPLAE RIRDLVKIAD ATDPLCDEAE CLLIYAARAQ LVANVIKPAL AQGQWVLGDR HNLSSLAYQG GGRGLMPLVE AVSTATLKGF KPDLTLYLDL DPKLGLTRAA KRGELDRIEQ QAIDFFERAR ATYLKLASED DSIVVIDASQ TMAEVHKDIL AVLQAMAW
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