Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_2560 |
Symbol | |
ID | 5754319 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | - |
Start bp | 3032775 |
End bp | 3034820 |
Gene Length | 2046 bp |
Protein Length | 681 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641288854 |
Product | carboxy-terminal protease |
Protein accession | YP_001554988 |
Protein GI | 160875672 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0793] Periplasmic protease |
TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.21905 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0506331 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGAAAAC TCACTTTGGC TACCTCGATC GCCACTGTTT TTGTCGGATT CTCGGCTTGG GCCGTACCAC CCACGATTCA AATCAGCGAG TTACCCACTC TCAAGCAGGA AGCGCAACAT AAGGTCGCGA GCAAAAGGGT AACGGACTTA TACACTCGTT CGCACTATCA TAGATTTAAT CTTGATGATG CCTTTTCTAC GCAAATTTTT GACCGTTATC TACAGCAGTT AGACTATCGC CGCAATGTGT TAACCCAAGC GGATGTCGAT AGCTTTAAAC CTTATGCCAC CCAATTCGAT GACATGCTCA GTTCTGGTGA ACTTGAGCCT GCCTATAAAA TGTTTGATAT CGTCCAAAAG CGTCGTTATG AAGGCTTTGT CTATGCTTTA TCCCTACTGG ATAAAGAGAT GGACTTCTCC GCCCCCGGCG ATGCCTATGA ATACGACCGT GACGATGCGG CATGGCCAAA AGATCAAGCC GAGATCAATG AGTTATGGCG TCAACGTGTT AAATACGATG CGCTAAATCT GAAACTCACA GGTAAAAAAT GGCCTGAGAT TGTTGAGATC CTGCAAAAGC GTTACAACAA CGCCATCAAA CGTTTGACTC AAACCAACAG TGAAGACGTG TTTCAAGGCG TGATGAATGC CTTCTCACGC AGCATTGAGC CGCATACGAG TTACCTGTCA CCACGCAATG CTGAACGTTT CCAAATGGAA ATGAATTTAA GCCTTGAAGG GATTGGTGCT CAACTGCAAC TTGAAGACGA TTATACTGTT ATTAAAAGCT TAATTGCTGG CGGCCCTGCG GCTGGCAGCG AAAAACTGTC GCCAGAAGAC AAGATTGTCG GCGTCGGTCA AGAAGGCGGT GAAATTGTTG ATGTGATCGG CTGGCGTTTA GACGACGTGG TTGATCTGAT AAAAGGACCT AAGGGCAGTA AAGTCGTACT GCAAATTTTA CCGAAGAAAG GTGGTTCGAA TGCTAAGCCA TTCGACGTTA CCTTAGTACG CGATAAAATT CGTCTTGAAG ACAGAGCGGC AACCTCTAAG GTGATTGAAC CTAAAGATGG CGAGTACGCT AATCGCAAAG TCGGTGTGAT CCATATTCCT GGTTTCTACA TGAATCTGTC ACAGGACGTT GAAAAAGAGC TAGTGAAGTT AAACGAAGCC AAAGTTGAAG GCATAGTCAT CGACCTTAGA GGTAACGGTG GTGGTGCATT AACAGAAGCC GTGTTGCTGA CGGGACTCTT TATCGATATG GGTCCTGTGG TGCAAATTCG TGATGCCGAT GGCCGTGTGT CTGCGCACCG TGATAACGAT GGCAAAACCA GTTATGCGGG CCCGTTGACT GTGATGGTTG ACCGTTACAG TGCTTCAGCC TCTGAGATTT TTGCTGCCGC ATTGCAAGAT TATGACCGCG CGCTGATTGT CGGTGAATCT AGCTTTGGTA AAGGTACAGT GCAGCAGCAT AAGAGCTTAG GCCGTATCTA CGATATGTAT GAAAAGCCAA TTGGTCATGT GCAATACACA ATTCAAAAGT TTTATCGGAT CAATGGCGGC AGCACTCAGC TTAAAGGTGT GACCCCCAAC ATTGCTTACC CAAGTGCGTT AGAGCCAGGT GAGTACGGCG AAGCTGAAGA GAAAAATGCA TTGCCTTGGG ATAAAGTGCC AATGGCGCAA TATGGCACGC TCAATGATGT GACGCCTGAG TTAGTGACTA GCCTTGAGGC CAAGCACCTT AACCGCATCA AAAGCAGTGT AGAGTTTGCT TATATCAATC AAGATATTGC CGACTTTAAA AAGCACCACA AAGAGAAGAC AGTTTCTCTG GTTGAAAGTG AGCGCATTGC CTCCCGCGAA GCCGATGAGA AGAAAGTCCT CGATAGAACG AACGAGCGCC GAGTCGCCAA TGGTTTAGCA CCGGTTAAAT CAATGGAAGA CATTAAAGAC GACGCCGAAT TGCCAGACGC ATTTTTAGAT GAAACGGCTT ATATCACTTT AGATATGGCT GATGCGCAAA AACTGGCTAA AACTAGTGCT AAGTAG
|
Protein sequence | MRKLTLATSI ATVFVGFSAW AVPPTIQISE LPTLKQEAQH KVASKRVTDL YTRSHYHRFN LDDAFSTQIF DRYLQQLDYR RNVLTQADVD SFKPYATQFD DMLSSGELEP AYKMFDIVQK RRYEGFVYAL SLLDKEMDFS APGDAYEYDR DDAAWPKDQA EINELWRQRV KYDALNLKLT GKKWPEIVEI LQKRYNNAIK RLTQTNSEDV FQGVMNAFSR SIEPHTSYLS PRNAERFQME MNLSLEGIGA QLQLEDDYTV IKSLIAGGPA AGSEKLSPED KIVGVGQEGG EIVDVIGWRL DDVVDLIKGP KGSKVVLQIL PKKGGSNAKP FDVTLVRDKI RLEDRAATSK VIEPKDGEYA NRKVGVIHIP GFYMNLSQDV EKELVKLNEA KVEGIVIDLR GNGGGALTEA VLLTGLFIDM GPVVQIRDAD GRVSAHRDND GKTSYAGPLT VMVDRYSASA SEIFAAALQD YDRALIVGES SFGKGTVQQH KSLGRIYDMY EKPIGHVQYT IQKFYRINGG STQLKGVTPN IAYPSALEPG EYGEAEEKNA LPWDKVPMAQ YGTLNDVTPE LVTSLEAKHL NRIKSSVEFA YINQDIADFK KHHKEKTVSL VESERIASRE ADEKKVLDRT NERRVANGLA PVKSMEDIKD DAELPDAFLD ETAYITLDMA DAQKLAKTSA K
|
| |