| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_2467 |
|---|
| Symbol | |
|---|
| ID | 5754226 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009997 |
|---|
| Strand | + |
|---|
| Start bp | 2918609 |
|---|
| End bp | 2919118 |
|---|
| Gene Length | 510 bp |
|---|
| Protein Length | 169 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 641288761 |
|---|
| Product | PTS system glucose-specific transporter subunit |
|---|
| Protein accession | YP_001554895 |
|---|
| Protein GI | 160875579 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2190] Phosphotransferase system IIA components |
|---|
| TIGRFAM ID | [TIGR00830] PTS system, glucose subfamily, IIA component |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0123922 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.167999 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGATTTT TAAGCCGAAT AAGGCGCTTG GTATCGGGCC AGACTCAGTT AGCTGGCGGT
ATCATGGTAT ATGCCCCCGT TTCCGGCGAT ATCGTCGCTA TTGAAAAAGT CCCCGATGTG
GTTTTTGCTG AGAAGATTGT CGGTGATGGC ATTGCCATCG CCCCCAAAGG CGAATTAATT
CTTGCGCCTA TCGACGGCAC CATCGGAAAA ATTTTTGAGA CAAATCATGC CTTCAGCATT
GAGTCTCCCC AAGGTTTAGA ATTATTTGTG CACTTTGGCG TCGGCACAGT CGAGCTGAGG
GGCAAAGGTT TTAAACGTTT AGCCCAAGAA GGCCAAGAAG TGAAAGTCGG CGATCCGATT
TTATCCTTCG ATATTGATTA TCTTAAAGAC CAAGTCGACA GCCTACTCAC CCCTGTCGTG
CTGGCAAACA TGGAAGACGT CAAATACCTA GACAAGGCTC AAGGCAGTGT CACTGCAGGT
AAAGACGTGA TCTTTACAGT ACAGCTCTAA
|
|---|
| Protein sequence | MGFLSRIRRL VSGQTQLAGG IMVYAPVSGD IVAIEKVPDV VFAEKIVGDG IAIAPKGELI
LAPIDGTIGK IFETNHAFSI ESPQGLELFV HFGVGTVELR GKGFKRLAQE GQEVKVGDPI
LSFDIDYLKD QVDSLLTPVV LANMEDVKYL DKAQGSVTAG KDVIFTVQL
|
|---|
| |