| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_2246 |
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| Symbol | |
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| ID | 5754002 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009997 |
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| Strand | + |
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| Start bp | 2669471 |
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| End bp | 2670115 |
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| Gene Length | 645 bp |
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| Protein Length | 214 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641288537 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_001554674 |
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| Protein GI | 160875358 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0703025 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00413313 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCATTTA GTCATGGAAA AGTGATCAAT ATTTTAGTGG TCGATGATCA TTCGTTGATT
TTTGATGGAT TACGGGGCTG TTTAGCGCCT TATCCTGAAC TTAATCTGAT TGGCTCGGTT
GAAGATGGGC TTGCGGTATA CGAGAAATGT CTCAAACTCA GGCCAGATCT GGTCTTTATG
GATCTTAAAT TACCCGGAAT GGGTGGATTG GACGTGATCC GTCAGCTCAG ACAACGTTGG
CCAGAGATGA TGATTATTAT GTTAACGGGG ACGATTGAGG AAAAAAGTGC ACGGGAAGCG
CTTGATGTAG GCGCCAATGG TTATGTATTA AAAAATAGCC CTAAGAGCAC ACTATTAGCG
GCAATTAAGT GTGTGAGTAA GGGCAAAAAT TTTATCGATC CTAGTTTAGA TGAGCAGCAA
ATAGACGCTT TGAGTGGAGT GGTCGATGGG GATATCCCTT TGCTGACCCC CCGTGAGCAA
CAAGTGCTAA AACTGATCTG TGAGGGGCGC CGCAACCGTG ATATTGCCGA AGATTTAGTG
ATTGGTTTAA AAACGGTTGA GACTCACAGG ATGAATTTAA TGCGCAAACT TAATGCGCAT
AACGTCGCCG AGTTAATGCA TTGGGTACAA AGGCTTGGAT TATGA
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| Protein sequence | MAFSHGKVIN ILVVDDHSLI FDGLRGCLAP YPELNLIGSV EDGLAVYEKC LKLRPDLVFM
DLKLPGMGGL DVIRQLRQRW PEMMIIMLTG TIEEKSAREA LDVGANGYVL KNSPKSTLLA
AIKCVSKGKN FIDPSLDEQQ IDALSGVVDG DIPLLTPREQ QVLKLICEGR RNRDIAEDLV
IGLKTVETHR MNLMRKLNAH NVAELMHWVQ RLGL
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