Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_2123 |
Symbol | |
ID | 5753873 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | + |
Start bp | 2533317 |
End bp | 2533952 |
Gene Length | 636 bp |
Protein Length | 211 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641288409 |
Product | hypothetical protein |
Protein accession | YP_001554552 |
Protein GI | 160875236 |
COG category | [S] Function unknown |
COG ID | [COG4382] Mu-like prophage protein gp16 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000011259 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTAGAAA CTAATCAAAA AGCCCCTGTG CATATTAATA CGCAGGCGCA CCCAGTCGCT CAACACAAGA AGCGCCTGAT CACTTTAATC AATGTGGCTA AGGGATCATT ACAGCTCGAT GAAGCCATCT ACCGCGCCAT GCTGAAAAAT GCCACGGGTA AAGATTCCTT GCGGGCAATG AACTTGCCAG AGCTTGAACA GGCGCTAGAA GTGTTTAAAC AAAAGGGCTT TAAAACCATA GCCTCTAAAC AAGGGGCAAC CAACAATAAA ACAGCGGTTA AACGCCGTTT AAGTCCTGCT GCGGGTAAAA GTAAATTGGC AAGCATAGAT AAAATACGTG CCATTTGGAT CACTATGGGC CACCACTTAG TTATCCAGGA TAACAGTGAA TCGGCGCTTG ATGCCTATGT GCGTCGCATG ACGCTACGTA GTAAAAGTGA AGGCGTGGAT GCCACCGCTT GGATGACAGA ACAGCAAGCC TACAAGGTAC TTGAAAGCCT GAAAAACTGG CATAAGCGCG TACTTATCGA GCGCATTATT GTCCGTGGTG AGCGGCTAAA GATGAATGAA GCTGGTACAC GCCCCGCAAA CTATGAAGTG ATCGTTGCGC AATACGAGGG GCATGACCAT GAGTAA
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Protein sequence | MLETNQKAPV HINTQAHPVA QHKKRLITLI NVAKGSLQLD EAIYRAMLKN ATGKDSLRAM NLPELEQALE VFKQKGFKTI ASKQGATNNK TAVKRRLSPA AGKSKLASID KIRAIWITMG HHLVIQDNSE SALDAYVRRM TLRSKSEGVD ATAWMTEQQA YKVLESLKNW HKRVLIERII VRGERLKMNE AGTRPANYEV IVAQYEGHDH E
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