Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_2061 |
Symbol | |
ID | 5753805 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | + |
Start bp | 2451098 |
End bp | 2452036 |
Gene Length | 939 bp |
Protein Length | 312 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641288342 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001554491 |
Protein GI | 160875175 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000270616 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.000108776 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGCGGATCA CCTTAAGACA ATTGGCGGTA TTTGAAGCTG TGGCGCGTAG TGGCCAAGTC GCAAAGGCGG CGGAGCAGGT TAATTTATCA CCACCTGCCA CTTCTATGGC TTTGGCTGAG TTAGAAAAAC AGCTCAATGC CCGCCTATTC GAGCGCATTG GCAATCGATT ACAGCTGAAC TCGCAGGGCA ATTTACTGTT GCCACTGGCG ACGGATTTAT TGCACCGTGT CGAGCAAATT GAGCAGGCAT TTACCTACCA TGGTGGCGAT TTGGTTGGGC GTTTAAGTAT CAGTGCCAGT TCGACCATTG GTAACTATCT GATGGCGAAA GCCGCAGTGG CATTTTGTCA GCAGCACACT CAAACCCATG TGGATGTGGC GATCACAAAT ACTCAAGATG TGATCCAAGC GGTTGCGCAG TTCCGATCTG AAATGGGCTT TATCGAAGGT CATTGCACCG ATAATCGTTT GAGTGTTGAA GCTTGGCATA AGGATAGGCT GCTGGTGTTT TGTCATCCGG CGCATCCTCT GGCGGGAAAA GTGGTTAAAC CGGCGCAAGT GAGAGGCCAG TCATGGGTGT TACGTGAAGA AGGCTCGGGC ACTCGTGAGT ATTTTGTCAA TGCTGCCAAT GAGTTGGATA TGCAGCCAGA AGCTAAGTTC TGCTTTACTA CGCCGGATGC AATTAAACTG GCGGTGAAAC AAGGTGCTGG GCTTGGGGTG TTATCTGAGC TGGCGCTGGA GAAAGAAATC AGCCGCAAAG AGTTGGCGTT AGTCACGATT GAGGGATTAG TGCTGGAGCG GCAGTTTTAT CGCATCACCC ATAAGAGCCG TCAGGCGACA TCCCTTGGCC AAGCTTTTGT GCAGTTCTGT GAGAATTTTT TCAATATCGC AGGCGTGGAA CCAAATAAGC AGTTTGATAG CAATGGCCAT ATGCAGTGA
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Protein sequence | MRITLRQLAV FEAVARSGQV AKAAEQVNLS PPATSMALAE LEKQLNARLF ERIGNRLQLN SQGNLLLPLA TDLLHRVEQI EQAFTYHGGD LVGRLSISAS STIGNYLMAK AAVAFCQQHT QTHVDVAITN TQDVIQAVAQ FRSEMGFIEG HCTDNRLSVE AWHKDRLLVF CHPAHPLAGK VVKPAQVRGQ SWVLREEGSG TREYFVNAAN ELDMQPEAKF CFTTPDAIKL AVKQGAGLGV LSELALEKEI SRKELALVTI EGLVLERQFY RITHKSRQAT SLGQAFVQFC ENFFNIAGVE PNKQFDSNGH MQ
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