Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_2031 |
Symbol | |
ID | 5753775 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | + |
Start bp | 2404339 |
End bp | 2411547 |
Gene Length | 7209 bp |
Protein Length | 2402 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641288312 |
Product | YD repeat-containing protein |
Protein accession | YP_001554461 |
Protein GI | 160875145 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3209] Rhs family protein |
TIGRFAM ID | [TIGR01643] YD repeat (two copies) |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.063176 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGCCAC TGTGGACGCT GCGCCGTAAA TCATCTTTTG CCGCTTTTAT GTTATTGCTT GGACTGGTAT GGCTAACACC GAGTTATGCG GCGTTGACGA AACCGAAGGT TGAGATAGAC CCAGTATTAC CAAACATTCC TTTACCTGTG GATGCACCGA CTCTTTCCGG CAGTCGATTT ACGTCAATTG TCGAATTACG ATGGGGGATT GATTGTTCCG TCACTGCCGT TAATATCCAG GAGTCACTTG ATGGCAGCGC TTGGACGAAT GTATACAGTG GATTGGGCCA AGCTGATAAT GGTGTTGTAG CCTATAAATC GTTTGCTGTT GGTGGCACGG TTTGTTCTGG TGGCTGGTCT TGGAAACGAA TATTACAGTT ACCCAACAAG ACTCTCTCTA GATATTACTA CCGAATCAAT GCTTGTAAAG GTTCATTGTG TAGCGCTTAT AGCCCCTCTA TTCTTGTTGG CAACCCTTCT GCGCCGACAA CTCCAACGTC ACCAACTTCG ATCTCCGCAC CTGCAACCAA TGCAACTGGA GCCTTTAGTG TTTCTTGGTC GAGCGTCAGT GGTGCTGCGC GTTATGAGTT ACAGCAACGA GTGAATGGTG GCGCTTGGGT CGCTAAGTAT TCAGGAACGG CCACAAATTA TGCGTTGTCG GGGCTCACTT CTGGCACTTA TCAGTATCAA GTGCGTGCTT GCACTACAGC GTGCAGTGCT TGGAAGTTAT CGAGCAATAC GCAGGTCACT TTGCCCGTTA CTGGCAGTGA TTGGAAAAAT CTATCTCGGG TATCGGTTGC GGATGCAGGT GGCAGTGACA CAGCACCTTC TGATGCTGTA GACCTCAACG CCGCATCGGT TAAAGGGCAA GCTGGCGTAT CGGGTGGTCA AGCAAGTTAT CAAATTCCCA TCGATTTACC GCCAGGGCGT AATGGCGTTC AGCCTTCAGT ATCGCTTAGC TATAACTCCC AAGGGGGGAA TGGCATTTTA GGTGTGGGTT GGTCACTCAA TGCAGGGTCA AGCATTAGTC GCTGCGGTGC AACCTTTGCC CAAGATGGCT TTACCCGTGC AGTCACCTTT AGTGCCTCAA CTGATCGATT GTGCCTCGAT GGTCAGCGTT TGATTGCTAC TACTGGTAGT TATGGTGCAA GTAATGCCGA ATATCGTACT GAGATGGATT CTTTCGTTAA AGTGGTACAA CAGGGCAATA TCAATGACAG TAATAGTCGT TTTACTGTCT ATAAACCTGA TGGAAATTCA GCAACCTATG GTGCAAATGC TAATAGTCGT TTTGTGCCGA GCGGTTTAAG TACTGCACTA AGCTGGAAAG TGACTCAAGA GTCGTACTCA GATGGTGCTA ATACAATAGA TTATAAGTAT GACGACTCGG TCGCAGGCGA GCACCTTCTA AGTCAGATTT TTTATACGGG TGGAAATGGT ATTCTAGGCG ATCGTAATGT CGAATTTATA TACGAACTGC GACCAGATGA ATCTCATCTT TATTTAGGCG GAGGAAAGAT ATCAAGTTCA CATAGATTGA CTTTTATTAA AATATATAAC AGTTCGAATT TGGTTGTAAG TTATGGTGTC CGTTATATTG TTAGCGATAA TAGTAATCGG AGTTTATTGG AGTTTATTGA AAGTTGTGAT CGCAAAGATA ATTGTTCAAG TGGAAGTCAT TTTGGGTGGT TTGATGGTAA AGCTAAATTT AAACTTGAGC CAACAGGTTT TACTAGAGAT GGTAATTTCC AACGAACTTA TAAAGATAAA GTAATTATTG AAAGTATTAT TCCTAGTGGT GACTTTGATG GTGATGGTTC GTTGGATTTT CCAGAGTACA ACACAAATGC GGAAGGGGAA TATACTAAGG GTAATAGCAA TAGACTTGAC TCTTGTATTT TGGATACTAG TCTGCAAATG TTTCATTGCG TTAGCCCTGA TATAGATAAT GATGGACGCA CTGATAGGTT GTCAGTAGCT GATGATGAAA CACTGGTTGT TAATTATGCG GATGGAAAGG TTGTCAGAAC AAAAATAAAA TTAAAGCAAA GTGATCCAAC TCAGGGTAGT TATGGAAATA AAGTGGATTT TGTTCGATAT TCTGGCGATT TTAACGGTGA CGGTTATATT GATTTAGTTG TCTCAAAGGT ATTTGATTAT AAGTTAAATA GACGAAATTT CTATCTGTAT CTGCACAATA AAAATCCTGA ACAACCTTAT GATGACACAG GTGTGTATCT AGGTTGTGGT CTGTGTTTAG TTGAAGATAA CAGAGGGCGA AACCGTAAAA TTGGTACTAC GACATTAGAA TTTCCAGGTG ATATAGATGG AAATGGCTTG CCTGATATCG CTGTCATGAA TCATTGGAAT CAATTGGAGG TCGGCACTGT ACAGGGGAAT TCTTCATTTA TAGAAATTGA TGAAGTATAT GTTGATTCTG TAAAGTTGAA TCAGTCAATG TCGACAGTTT TGTTTTCAAA CTTAAATGTA TCTTCATTAA ATAATGAACA CAGCTATTCA TTTTTCGCTG ATGTTACTGG TGATTCGCTT CCTGACTTAT TAGATTTGTC AAATGGATTT GTTAGGGTTA ATAAAGGTGG CTCTTTTTCT GAACCAAAAA AAAGCTTTAA GCTGCCTAGT GTTGAGTGGT TGCAATATTC TCCTGATGGT CATGAGTTAC TTGAAGGGAA TAAATTGTAT TTTAATGATG CTATGTTAGT TTATGATATA GATTCAGATG GTTCTGTAGA TCTTTTGGTG CCAGATAAAG TAGCCGTTGC TTCATGTGCA AAAATATGGG AGTTTAAGCA CGGTGGTGGA AGTAACCCTA ATCAGACTAT GACACCTAAA ACTCTATGTG GTAGGGATAT TTATGGAACC TATAAGTCTG ATCCTTATGA TTACAACGTT CGATCTCCTA TACCTTGGGA TATAAAAGAT GAGAGTTTAT ATTATTTAAA AAAGATAAAT TTAAAACTTA CAGACAATGA TGATATTGTT ATTAGCGAAG AGAATACTGA TTTTATTTCC TCCGCGCGCA AAGCTACGGT TGTAGATGTG CATGGTAATG GTACGCAAGA CTTATTATTT ATGTATGGCA GCCGTTATAG CAACCCTAAA GAAAATACTT ATAATTGGTA TCCATCAGGT GCTGCAAATG GTACACCGTT CAGTGGCAAA GATTATGGTG CGTATTTCTA TCGTAACTAT GGCTCAGGTT CAGGCGCTTC TGGTAGCGAT TACCAACCAG TAGATTATCT ACAATCTGTT ACGGATGGAT TGGGTAATAA CAGTGAGTGG CGTTATCGCC CACTGTCAAC CGGAGAAGGT AGCGCCGGAC AATCCAAACT CTATACAACC GACCATGATG AAGTTGGTAC TGGTTATGTC CATTTTGCCT CCAGTATGTA TGTGGTGCAG TCCTTTAAAC AAAGCAACGG ACAGAGTGGC GAAAATGAAA CCCAATATGC CTATAAAGGC GCGATGTATC ACCTGCAAGG GCGTGGTTTT ACCGGATTTA ATCAAATCTG GGAAAAGGAT ATGCAGCGGG ATAAGACGGT GCATAGTGTC TTCAAGCAGA AGTTCCCTGA GGTGGGATTG CTAACTGAGC AAACGGTCAG CGTGGGCTCG ACTACCGTTA ACCAAGTGAA TAACACTTGG GCAGATAATC CACAACACAC CATAAGCGGT GTTTATCACA ATATTCAAAC CCGTTCGCTA CAACAGAGCT GGGACTTACA AAGCACGCCT TTATCAACAC AAGAAGTGCA AATAAGTGCC AGTGATGTTG ATTCATCGGG CAATATTAAA AAGCAAACTC AAAAACTGAC CGATTACATT AAGGGTCAAG CTAACACCTA TACCAGTACC ACTGAAACCA GTTTTGCCGT TGATACCAGC AACTGGTGGC TTAACAAATT TAATGAGATA CGCACCAGCC ACGATACCGT TCAGCGCGCT TGGGGAGATG ATCCTGTAGG CACAAATGAT AAAGCCCAAT GGCAACTCCA AACGGTGAAT ACGTGGGACG ATGTGCATAA ATTGCCCACG CAAGTGACTT ATACTGCCAG TAACACCAGT TGTAATCGCG TCGAGCAAAC CGGCTTAAAC AGCTATGGTT TACCGCTCTG GACTAAAAGT ACAGGGCAAA GTAGTGCGTG TACTGCCATC ACGGCGAGAC AAAACAACTT TACCTACACC AAAGACGGTA AAACTCAAGT TGACGATGGC TATCTGCCTT ACAAAGTTAC CAATGCCAAA GGTTATATCA CCACTACCGA ATACGATATG GGGCTAGGAC TTCCCATTAA AGTGGTCGCG CCCAATAATA TCGTGACCCA AACCGAGTAC GACGGTATCG GTCGTCCAGT ACAAATGCAG CAGACGGGCA GTCCGACACG TTATCTGCGT TACTTACTCG CGAATGAAGG TAATAACGCT CCACAGGATA ATGATAACGT TCCCGTTGTG ATGACCCGCA CGAGTGGGGC GGGGATGCCC GAGAGTGAGC AGTATTTTGA CGGTCAAGGC CGATTACTGC GCACCGCCAC GCAAGGTTTT GATGGCGGTT ATCAATACCA AGACAAGCAT TATGATGCGT TAGGGCGCAT GACCCGAGAT TCAACGCCCT ACGGTAATGG CACCGCTGCC GACTATACCG AGTTTAGTGA CTTTGATGCG CTCGATAGAC CTATCAGACG CACGATTCCT AATGGTCGTT CCGGCGGGCT GGAGTCGATT TATACCTATA ATGGCCTGAC AACCAATATT AATGTTGAAG GTCGCACTAT GTCGCGCACC TATGGCAGTC AAGGTTGGTT GTATGAAACG GTGGATGCGC AAGATGGTAC CAATCGTTTT GCTTATGATG GTGCGGGCCG TCCTTTAGTC ATACGCGATG CCAATAACCG TGACATTAAA GCCACCTACA ACGGTTTTGG ACATAAAACG CAGGTAATAG ACCCTAACCA AGGCACCACA GTCTTTGGGT ATAACACCTT AGGTGAGCTT GATAAGCAAA CCGATGCCAA CGGTGTGGTG CAAACTTATG TGCTTGATGT GCTGGGTCGT ATCACTAGCA AAACCACTAC AGGCGGCAGC GCGCCCGGCC AGGCTGTTTT TTATTGGGAT GGTAATATTA ACAACGATGC AAAAATAGAA ATTATTGGTC AGTTAGGCTT ACTCACCTCT GAAACCGAAA ACGGCGTCGC TCGCACTTAT GCCTATACGA CTGCGCTGCA ATTGGCGCAA ACCACCGTTA CCGTTGATGG TGTAAGCCGT ACGGTTAAGC ATCAATACGA TAGCTTCTAT GGTCGTCCCA AAGCCTTGGA ATACCCCAAT GGTTTGACTC TTAAATATGG CTATAACGAT TACGGCTACC TTGAGCAGAC CAGCAACGCT GCCTCCGGCT ATTTGTATCG TCAAATCACG GCTATGGATG AGGCTGGCCA TATTACCGGC GCTAGCCTAG CCAACAGAGT GATGTCTGAG TCACGGGTTT ATTACAGTGA AGGCACAATG TCGAGTGTGG AAGTGGATGG GCCATTAGGC CTGATTCACG GTCATTACTA TGACGGTTAC GATGACTTTA TGAACCTCAC CAGTGAGCGT AATGGTGTCA CAGGGCTAGT CAAAAGTTAT CGTTATGACA GCTTGAATCG ATTGGAAGAA TACCAGTTTA ATAATACCAA TCCGAACTTC ACCGCCACGG TCAATTATGC CTATGACAAA GTAGGGAACT TCCTAAAGAA GACCGATTAC AGTGCTAATG CCACTAATGC CTATCGCTAT GGAGGTAATG CTGGCTGCGC AGCTAACAGT AATGCAGGCC CCAATGCGGT ATGCCAACTG AATAAGCTCA ATGGCTCAAC AGTTAACTTT CAATATGATA AACGTGGAAA CCTGCGTGTG GGTGACGGTT TAACCATGAC CTATAATGCC ATGGATAAGC CGCTGACTAT TTCAGGGAGG GGGCCGAACA ATAACACCCT AACGGCTTTT GTGTATGGCA GCGATAGTAT GCGGGCCAAG CAAAGTCGTA CAGTGTCAGG CAGCGCAACC ACTACCTATT ATGTCGATAA GTATTATGAA ATCGATAATG ATGGCAGCTG GCGTGCCTAC CTCGATGACA TTGCAGTGTT AAGTTACACT CCACAGCGCA GCCATTTACT GCAGTTCACT TTGCGAGATA GGCTGGGCAG CGCGACGACC ATGGCAGACC AAAACGGTAA TATTGTCAGC CAGCGTTATT TTGACCCTTT TGGGCGCACA ACGGACCTTG GATATAATCA TAAGCTGGAT ATTCAGAATA AGAATACCTT GTTATCCCAG CTGCAAGATT TAGCTGTGAC CAACAAAAAC CGCCGTGGTT TTACCGACCA TGAGCACTTG AATGAACAGC AGTTAATTCA TATGAACGGC CGGGTGTACG ATTACAACCT GGGTCGGTTT ATGTCGGTGG ACCCGTTTAT TTTTGATTTG AGCAGTACGC AATCAATTAA CCCGTACTCG TATATCTTGA ATAATCCGCT GGCGGGAACA GACCCTACAG GTTACAACCC CATTTTAGAT AACAGGGCAA TGAATTTTTC AATAACAGCA ATGACGTCCA CTGGTACTTT ATCTGATGAA CTGGTAGATG TTATCGTTCA GGCTGAATCA AGTATTGGTA ACTCTGAAGC TGGCGGTGCT GCTGAAACAG GTAAACTTAT CAGACAAGCT GTTATTGCAG GTAGTTTTGC TGGGTTAGCT AAAATTGCTG AAAAAGCAAT TGATAAATCG AGTAAAAAGT CAGGTAACAA ACAAAGCTCG AAAACTAAAA GTAATGGTTC AAACTCTCAA ACCAAAGCAG AAAATGGTAA AGTATCTGAA ATCGGCAAGC CGTCTTCAGA TAGAGCTGGA GGCAATTCTA ATATACAAGG ACCACCAGAT ATGGTTAGAG GAGAAACTGA TGGAAGACAT GAACCAGATG GAAAACCAGG TCCTAGAGTT AAAGTGACTT ATCCTGACGG TGCTGAGAAG GATATAACTT CTGAAAGGGT AAAGGAAAAA ATAGTAAATG CTCACCCAAA TGCTCGCTCT AAAGATGGTT CTGTACCAAA AAACGACGTC AAAAAAATGG AGAACTCAAT AAATAAAGAT GGTTCAAAGA GGGAACCTGA CGAGTTCGAA AGAGAGCTAT TAAAGAATAA GTCGATTAGG AAGGAATAA
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Protein sequence | MLPLWTLRRK SSFAAFMLLL GLVWLTPSYA ALTKPKVEID PVLPNIPLPV DAPTLSGSRF TSIVELRWGI DCSVTAVNIQ ESLDGSAWTN VYSGLGQADN GVVAYKSFAV GGTVCSGGWS WKRILQLPNK TLSRYYYRIN ACKGSLCSAY SPSILVGNPS APTTPTSPTS ISAPATNATG AFSVSWSSVS GAARYELQQR VNGGAWVAKY SGTATNYALS GLTSGTYQYQ VRACTTACSA WKLSSNTQVT LPVTGSDWKN LSRVSVADAG GSDTAPSDAV DLNAASVKGQ AGVSGGQASY QIPIDLPPGR NGVQPSVSLS YNSQGGNGIL GVGWSLNAGS SISRCGATFA QDGFTRAVTF SASTDRLCLD GQRLIATTGS YGASNAEYRT EMDSFVKVVQ QGNINDSNSR FTVYKPDGNS ATYGANANSR FVPSGLSTAL SWKVTQESYS DGANTIDYKY DDSVAGEHLL SQIFYTGGNG ILGDRNVEFI YELRPDESHL YLGGGKISSS HRLTFIKIYN SSNLVVSYGV RYIVSDNSNR SLLEFIESCD RKDNCSSGSH FGWFDGKAKF KLEPTGFTRD GNFQRTYKDK VIIESIIPSG DFDGDGSLDF PEYNTNAEGE YTKGNSNRLD SCILDTSLQM FHCVSPDIDN DGRTDRLSVA DDETLVVNYA DGKVVRTKIK LKQSDPTQGS YGNKVDFVRY SGDFNGDGYI DLVVSKVFDY KLNRRNFYLY LHNKNPEQPY DDTGVYLGCG LCLVEDNRGR NRKIGTTTLE FPGDIDGNGL PDIAVMNHWN QLEVGTVQGN SSFIEIDEVY VDSVKLNQSM STVLFSNLNV SSLNNEHSYS FFADVTGDSL PDLLDLSNGF VRVNKGGSFS EPKKSFKLPS VEWLQYSPDG HELLEGNKLY FNDAMLVYDI DSDGSVDLLV PDKVAVASCA KIWEFKHGGG SNPNQTMTPK TLCGRDIYGT YKSDPYDYNV RSPIPWDIKD ESLYYLKKIN LKLTDNDDIV ISEENTDFIS SARKATVVDV HGNGTQDLLF MYGSRYSNPK ENTYNWYPSG AANGTPFSGK DYGAYFYRNY GSGSGASGSD YQPVDYLQSV TDGLGNNSEW RYRPLSTGEG SAGQSKLYTT DHDEVGTGYV HFASSMYVVQ SFKQSNGQSG ENETQYAYKG AMYHLQGRGF TGFNQIWEKD MQRDKTVHSV FKQKFPEVGL LTEQTVSVGS TTVNQVNNTW ADNPQHTISG VYHNIQTRSL QQSWDLQSTP LSTQEVQISA SDVDSSGNIK KQTQKLTDYI KGQANTYTST TETSFAVDTS NWWLNKFNEI RTSHDTVQRA WGDDPVGTND KAQWQLQTVN TWDDVHKLPT QVTYTASNTS CNRVEQTGLN SYGLPLWTKS TGQSSACTAI TARQNNFTYT KDGKTQVDDG YLPYKVTNAK GYITTTEYDM GLGLPIKVVA PNNIVTQTEY DGIGRPVQMQ QTGSPTRYLR YLLANEGNNA PQDNDNVPVV MTRTSGAGMP ESEQYFDGQG RLLRTATQGF DGGYQYQDKH YDALGRMTRD STPYGNGTAA DYTEFSDFDA LDRPIRRTIP NGRSGGLESI YTYNGLTTNI NVEGRTMSRT YGSQGWLYET VDAQDGTNRF AYDGAGRPLV IRDANNRDIK ATYNGFGHKT QVIDPNQGTT VFGYNTLGEL DKQTDANGVV QTYVLDVLGR ITSKTTTGGS APGQAVFYWD GNINNDAKIE IIGQLGLLTS ETENGVARTY AYTTALQLAQ TTVTVDGVSR TVKHQYDSFY GRPKALEYPN GLTLKYGYND YGYLEQTSNA ASGYLYRQIT AMDEAGHITG ASLANRVMSE SRVYYSEGTM SSVEVDGPLG LIHGHYYDGY DDFMNLTSER NGVTGLVKSY RYDSLNRLEE YQFNNTNPNF TATVNYAYDK VGNFLKKTDY SANATNAYRY GGNAGCAANS NAGPNAVCQL NKLNGSTVNF QYDKRGNLRV GDGLTMTYNA MDKPLTISGR GPNNNTLTAF VYGSDSMRAK QSRTVSGSAT TTYYVDKYYE IDNDGSWRAY LDDIAVLSYT PQRSHLLQFT LRDRLGSATT MADQNGNIVS QRYFDPFGRT TDLGYNHKLD IQNKNTLLSQ LQDLAVTNKN RRGFTDHEHL NEQQLIHMNG RVYDYNLGRF MSVDPFIFDL SSTQSINPYS YILNNPLAGT DPTGYNPILD NRAMNFSITA MTSTGTLSDE LVDVIVQAES SIGNSEAGGA AETGKLIRQA VIAGSFAGLA KIAEKAIDKS SKKSGNKQSS KTKSNGSNSQ TKAENGKVSE IGKPSSDRAG GNSNIQGPPD MVRGETDGRH EPDGKPGPRV KVTYPDGAEK DITSERVKEK IVNAHPNARS KDGSVPKNDV KKMENSINKD GSKREPDEFE RELLKNKSIR KE
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