Gene Sbal195_1956 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal195_1956 
Symbol 
ID5753699 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS195 
KingdomBacteria 
Replicon accessionNC_009997 
Strand
Start bp2339933 
End bp2340565 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content46% 
IMG OID641288237 
Producthypothetical protein 
Protein accessionYP_001554387 
Protein GI160875071 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG2095] Multiple antibiotic transporter 
TIGRFAM ID[TIGR00427] membrane protein, MarC family 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.466227 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGAGTTAA CTCTTTACGT TAAATTTTTT CTTGGCCTAG TTGCCATCAT CAATCCGGTC 
GGGTTGTTGC CTGTGTTTGT GAGCTTAACC AGCCATCAAA CTGAAGCTGA GCGAAATCAC
ACGGGTAAAG TGGCTAACTT TGCGGTTGTG GTGATCCTCT TAGTCACGAT TGTGGCGGGT
CAGCACATTC TTAATATGTT CAGTATTTCG TTATCAGCCT TTAGGATCGC GGGTGGTAGT
CTGATCGCCA TTATTGCGAT GTCGATGTTG CAAGGTAAGT TAGGCGAAGT GAAGCGTAAC
CAAGAGGAAG ACCGCGAATC CTCGGCGATG GAATCGGTGG CGGTTGTGCC TTTAGCTTTG
CCACTGATGG CGGGACCTGG TGCTATCAGT TCGGTGATTG TCTTTGCCGC TGAGCATAAT
TCATTGTCGA ACATCATTGC GATGTTCATT ACTGTGATTG TGTTTGGTTT AGTGAGTTTT
GGCCTGTTTA GAATGGCATC CGTCATCTAT AAGATTTTGG GTAAGACGGG GATTAACGTC
ATTACTCGTC TTATGGGGCT GTTAATGCTA TCCATAGGTA TTGAAGTGAT TGCGGCTGGT
GTAAAGGGAT TATTCCCGCA GCTCTTTAGC TAG
 
Protein sequence
MELTLYVKFF LGLVAIINPV GLLPVFVSLT SHQTEAERNH TGKVANFAVV VILLVTIVAG 
QHILNMFSIS LSAFRIAGGS LIAIIAMSML QGKLGEVKRN QEEDRESSAM ESVAVVPLAL
PLMAGPGAIS SVIVFAAEHN SLSNIIAMFI TVIVFGLVSF GLFRMASVIY KILGKTGINV
ITRLMGLLML SIGIEVIAAG VKGLFPQLFS