Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_1927 |
Symbol | |
ID | 5753670 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | + |
Start bp | 2298146 |
End bp | 2298805 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641288208 |
Product | two component transcriptional regulator |
Protein accession | YP_001554358 |
Protein GI | 160875042 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000341688 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTATTA TGTTGGTTGA AGACAATGAG TTATTAGCCC AAGGGATTTG CTTAAGTTTG GCAAAGCTGG GCATGCAGGT TGATCACCTT AATAGTTATC AGCAAGCATT ACAGGGTGTT AAAAATGAAA GCTTCAGTGC CATAGTGCTC GATCTGGGTT TACCGGACGG TAACGGTAAA GATTTACTCA AGGCGTGGCG TCAGCAGGGG GTGTCAATTC CTACAATAGT CCTGACCGCC AATACGGATT TTGACACTAA GCTCGAGTGC TTAGACATGG GCGCCGATGA TTATCTCGGT AAACCCTTCG ATGTGCGAGA GCTCGCCGCT CGCATTCGCG CCATTGTCAG ACGCCAGTAC GGACTCGATC ACAACAGTTT GATTATTGGT GCTTTGTGTA TTGATTTAAA TACCCGCGAA GTGACCTTTC GCGATCAAAA TGTGCTGCTT TCGCGGCGTG AATTCCAATT ATTGCTTGAA CTCGCACAAT CAGCAGGGCG CGTATTGACG CGCAGCCAAC TGGAACAGTT AACCTATGGC TGGGATGAAG TCGGCAGCAA CTCGATTGAA GTACACATTC ATCATTTGCG TAAAAAGCTC GCCAATGAGC TGATTAAAAC CGTGCGTGGA ATCGGCTATA CCTTGATTGA AATAAACTAA
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Protein sequence | MRIMLVEDNE LLAQGICLSL AKLGMQVDHL NSYQQALQGV KNESFSAIVL DLGLPDGNGK DLLKAWRQQG VSIPTIVLTA NTDFDTKLEC LDMGADDYLG KPFDVRELAA RIRAIVRRQY GLDHNSLIIG ALCIDLNTRE VTFRDQNVLL SRREFQLLLE LAQSAGRVLT RSQLEQLTYG WDEVGSNSIE VHIHHLRKKL ANELIKTVRG IGYTLIEIN
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