Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_1908 |
Symbol | pheT |
ID | 5753651 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | + |
Start bp | 2276607 |
End bp | 2278994 |
Gene Length | 2388 bp |
Protein Length | 795 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641288189 |
Product | phenylalanyl-tRNA synthetase subunit beta |
Protein accession | YP_001554339 |
Protein GI | 160875023 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0072] Phenylalanyl-tRNA synthetase beta subunit |
TIGRFAM ID | [TIGR00472] phenylalanyl-tRNA synthetase, beta subunit, non-spirochete bacterial |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00255913 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAATTTA GCGAATCTTG GCTTCGTGAA TGGGTAAACC CTTCAGTCAG CCGTGAAGCA TTATCCCACC AGATCACTAT GGCCGGTCTC GAAGTCGATG ACGTTGAAGC CGTAGCAGCC GATTTTAGCG GTGTCGTGAT TGGTGAAGTG GTTGAGTGTG GTCAGCATCC TGATGCCGAT AAACTGCGCG TGACCAAAAT CAATGTTGGT GGTAGCGAAC TTATTGATAT CGTCTGCGGT GCACCAAACT GCCGTCAAGG TCTTAAAGTG GCCGTGGCTA TGGTTGGTGC CGTATTACCT GGCGATTTCA AAATCAAGAA AGCTAAGCTG CGTGGCATGC CATCAGAAGG CATGTTGTGC TCGTACAGTG AGCTTGGCAT TAACGTCGAA AGCGATGGCA TTATCGAATT GCCATTGGAC GCGCCATTAG GCACTGACAT CCGCGATTAT CTGCAACTTA ATGATGCCGT TATCGATGTA GATTTAACGG CTAACCGTGC CGATTGCTTA GGCATGGCAG GTCTTGCCCG TGAAGTAGGC GTGTTAAACC GCCAAACAGT GGTTGAGCCA CAGTGGCAAG CCGTCACGCC AACGACAGAT GCACAGGTCA CGATTAACGT TAACGCGCCT GCAGCGTGTC CACGTTACTT AGGCCGTGTG GTTAAAAACG TCAATGTGAA AGCGCCTACG CCATTATGGA TGCAGGAAAA ACTGCGCCGT AGCGGTATTC GCTCTATCGA TCCTATCGTT GATATCACTA ACTTTGTGTT GATTGAATTC GGTCAACCTA TGCACGCTTT CGATCTTGCC AAGTTAACGG GCGATATCCA AGTGCGTTTA GGCACTGGCG AAGAGAAAAT CACCTTGCTT GATGGCAGCG AAGTGACCAT CCCAAGCGAT ACCTTAGTGA TCGCCGATGA TGCGCGTCCA TTAGCCCTTG CAGGCGTGTT TGGCGGCGAA TATTCAGGCG TGAGCGACAC GACCCAAGAC ATACTCCTTG AATGTGCGTT CTTCTCGCCT CTTGCCATTA TGGGTAAGTC ACGTCGTTTA GGTTTGCACA CAGATTCATC ACACCGCTTT GAGCGTGGCG TTGACCCTGA GATGCAACAC AAGGTTATCG ACCGTGCGAC CCGTTTAGTG CTGGATATCT GTGGCGGTGA AGCAGGCCCT GTGGTCGAAG CTAAATCAGA GGCTGATTTA CCCAAACCTG CACAAATCGT GTTACGTCGC AGCAAGTTAG ATCGAATTTT AGGTCACCAT GTACCAGACA CAGATGTGGT CGAAATTCTA CAACGTCTCG GCTTCAGTTT GGTTGTGGGC CAAGATAGCT GGCAGGTCAC CACTGCGACT TATCGTTTCG ATATGGCGAT TGAAGAAGAT TTGATTGAAG AAGTGGCGCG TATTTACGGT TATAACAATA TCCCGAATAT CGCACCCGTT GCCGCGCTGC GTATGTCAGA TCATAAAGAA TCTGACTTGA GCTTAAAACG CGTGCGTGCC TTATTGGTCG CTCGTGGCTT CCAAGAAGCG GTAACCTACA GCTTTGTCGA TCCCAAACTG CAAAATCTGG TTCACCCTGG TTTAGACGCT ATGGTGTTAC CAAACCCAAT TTCCAGTGAA ATGTCGGCCA TGCGCCTGTC AATGTTCACC GGTTTATTGG CCGCCGTTGG CTACAACCAA AGTCGTCAAC AGAGTCGCGT GAGACTTTTT GAAACTGGCC TGCGCTTTGT TCCTGATATC AATGCAGAAT CCGGTGTAAG ACAGCAAGCA ATGCTCGCTT GTGTCATTAC TGGGCTCCAA AATGATGAAC ATTGGGCTAT GGAATCGAAA ACTGTTGATT TTTTCGACCT TAAAGGTGAT TTAGAAGCAA TTATCGGCTT GACAGTTTCC GCATCAGAAT TTAGCTTTAG AGGAGCGATG CATTCTGCTC TCCATCCGGG GCAATGTGCT GAAATATTGA GAAATGATCG AGTGATCGGT CATATAGGTG CAATCCATCC TAGTTTGGAG AAGCCTTTTG GACTCAATGG TAAAACCATC GTTTTTGAGT TGGAATTGGA TGCTTTATTG CATACCAGTT TGCCGCTAGC CCAAGCTGTA TCTAAGTTTC CAGCTAATCG TCGTGACATC GCAGTCGTAG TAGATGAGAG TGTATCTGCA GGTGATGTAA TGAAATTGAT AAGAAAAGTT GGCGAAAATC AGTTGGTTGG CATAAACTTG TTCGATGTAT ACTTAGGTAA AGGTGTTGAA CCTGGCAAGA AGAGCCTGGC GATAGCACTT ACATTACAAG ACACTACTCG TACGCTTGAG GAAAAAGAGA TTGCTGAGAC CGTTGGTTCA GTCGTTTCTG CCCTTAAGTC CGAGTTCAAC GCATCGTTGA GGGATTAA
|
Protein sequence | MKFSESWLRE WVNPSVSREA LSHQITMAGL EVDDVEAVAA DFSGVVIGEV VECGQHPDAD KLRVTKINVG GSELIDIVCG APNCRQGLKV AVAMVGAVLP GDFKIKKAKL RGMPSEGMLC SYSELGINVE SDGIIELPLD APLGTDIRDY LQLNDAVIDV DLTANRADCL GMAGLAREVG VLNRQTVVEP QWQAVTPTTD AQVTINVNAP AACPRYLGRV VKNVNVKAPT PLWMQEKLRR SGIRSIDPIV DITNFVLIEF GQPMHAFDLA KLTGDIQVRL GTGEEKITLL DGSEVTIPSD TLVIADDARP LALAGVFGGE YSGVSDTTQD ILLECAFFSP LAIMGKSRRL GLHTDSSHRF ERGVDPEMQH KVIDRATRLV LDICGGEAGP VVEAKSEADL PKPAQIVLRR SKLDRILGHH VPDTDVVEIL QRLGFSLVVG QDSWQVTTAT YRFDMAIEED LIEEVARIYG YNNIPNIAPV AALRMSDHKE SDLSLKRVRA LLVARGFQEA VTYSFVDPKL QNLVHPGLDA MVLPNPISSE MSAMRLSMFT GLLAAVGYNQ SRQQSRVRLF ETGLRFVPDI NAESGVRQQA MLACVITGLQ NDEHWAMESK TVDFFDLKGD LEAIIGLTVS ASEFSFRGAM HSALHPGQCA EILRNDRVIG HIGAIHPSLE KPFGLNGKTI VFELELDALL HTSLPLAQAV SKFPANRRDI AVVVDESVSA GDVMKLIRKV GENQLVGINL FDVYLGKGVE PGKKSLAIAL TLQDTTRTLE EKEIAETVGS VVSALKSEFN ASLRD
|
| |