| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_1899 |
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| Symbol | |
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| ID | 5753642 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009997 |
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| Strand | + |
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| Start bp | 2268366 |
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| End bp | 2269475 |
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| Gene Length | 1110 bp |
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| Protein Length | 369 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641288180 |
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| Product | ribonuclease D |
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| Protein accession | YP_001554330 |
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| Protein GI | 160875014 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0349] Ribonuclease D |
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| TIGRFAM ID | [TIGR01388] ribonuclease D |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000359973 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.61142 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTCAGCGT TTCAATATGT GAGTGATGAA GCAAGCCTTA ATGCCCTCGT TGCCCAATAT
AAACAGAGTA AGATACTCGT GTTAGATACC GAGTTTGTTC GTACTCGTAC TTATTATGCC
AAGCTAGGTT TGATCCAAGC CTATGATGGT AAAACCTTAG CTTTGATTGA TCCTGTGGCT
TTACCTGATT TAGCCCAGTT TTGGGCGCTA TTATCGGATC CGAATATCAT TAAGCTTGTG
CATTCCTGCA GCGAAGATTT AGAAGTGTTT GCCCACTACG GTAAATGTCA ACCTACGCCT
TTGTTTGATA GCCAAATTGC CGCCTCTTTG TGTGGTATGG GCCATGGTGT GGGTTATGCC
AAGTTAGTTG AAACTTGCTT GGGTGAAGTG ATCGATAAAG GCGAGTCGCG TACCGATTGG
ATCCGCCGCC CTTTAACGGA AGCCCAGTTA AGCTACGCCG CGAATGACGT CCTGTACTTG
TATCAGCTCT ATCCTCAACT GGAAGCGAAA CTCAGCGCCC AAGGCCGTTT AGCTTGGTTA
TACGAGGAAG GGGAAAGGAT GACTCAGGGC AGGCTTGCCG ATCCTGATCT CGACACGGCT
TATTTGAAAG TGAAAAATGC TTTCCAACTG ACCGAAATCC AATTGGCTTA CCTTAAAGTG
CTCGCCAAGT GGCGTCTTGA AAAAGCCTTA GTGCGTGATT TAGCCCTAGG TTTTGTGGTC
AAAGATCATG GTCTTATCGC ATTAGCGAAG AAGCAACCTA AATCCTCGGC CGACTTGTTT
AAGCTCAATG ATTTGACTGA GCAAGAAAAA CGTATCCACG GAAAAGATTT ATTACGTGTG
CTGCAAACCG CTGATTTGGT CAATTTACCC GAATTAGTGG ATGTGTTGGC GTTAAAATCA
GGCTACAAAT CGGCCTTTAA GGCGATTAAA AGCTGCTTAG TCGAGTTGTG CGAACAGCAT
GATGTGCCGC AGGAAATGCT CGGTTCTAAA CGTCATATCC ATGAGTTTTT GCAATGGCGT
TGGGATAAGC AACAAGGGGA TTTGCCCGCG GTGTTATGCG GATGGCGGGG CGAGATTGCC
GCTGAGTCCC TAGCTAAGCT TGAGGTCTAA
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| Protein sequence | MSAFQYVSDE ASLNALVAQY KQSKILVLDT EFVRTRTYYA KLGLIQAYDG KTLALIDPVA
LPDLAQFWAL LSDPNIIKLV HSCSEDLEVF AHYGKCQPTP LFDSQIAASL CGMGHGVGYA
KLVETCLGEV IDKGESRTDW IRRPLTEAQL SYAANDVLYL YQLYPQLEAK LSAQGRLAWL
YEEGERMTQG RLADPDLDTA YLKVKNAFQL TEIQLAYLKV LAKWRLEKAL VRDLALGFVV
KDHGLIALAK KQPKSSADLF KLNDLTEQEK RIHGKDLLRV LQTADLVNLP ELVDVLALKS
GYKSAFKAIK SCLVELCEQH DVPQEMLGSK RHIHEFLQWR WDKQQGDLPA VLCGWRGEIA
AESLAKLEV
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