Gene Sbal195_1893 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal195_1893 
Symbol 
ID5753636 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS195 
KingdomBacteria 
Replicon accessionNC_009997 
Strand
Start bp2262654 
End bp2263367 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content50% 
IMG OID641288174 
Productpeptidase M22 glycoprotease 
Protein accessionYP_001554324 
Protein GI160875008 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1214] Inactive homolog of metal-dependent proteases, putative molecular chaperone 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.546887 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAATAA CACACGAACA CTCTGCTTGT ATTCTTGCCT TAGACACTTG TACCGAATCC 
TGCTCAGCTG CGCTGCAATA TCAAGGTCAG ATTTATGCTG AACTTGCCGA TGCGCCGCGT
GAACACAGCC AGCGTCTGTT GCCTATGGTC GATTCAGTGC TCAAGCAAGC GGGCATTAGC
TTAGATAAAG TGGCGGCGAT TGCCTATGGT CGAGGTCCTG GCAGTTTTAC GGGGATCCGT
ATCTGCACTA GCATGACCCA AGGTCTGGCA CTGGGGTTAG ATTTGCCTGT GATTGGTATT
TCAACTTTAG CGGCAATGGC ACAAATGGCC ATTAGCGAGC ATCAAGCCGA GCAAGTGCTG
TGTGCCATTG ATGCGCGCAT GGGTGAAGTG TATTGGGGGC AGTTTGTGGC CGTCGATGGT
ATTGCGACAT TAGTCGGTAA AGAAGTGGTC AGTGCGCCTG CCAACGTACA ACTTCAGCTT
GATACTGAAG CGCCCATTGT GGCTTGCGGC ACCGGTTTTG ATGCGTATCC GGATTTACTG
GCACTCGGCA AAGGGATTTT AGCTCTCGAC GCCGTGAAAT ATCCCGATGC AAGGGCTATG
CTGATATTGG CTGAGACAGG TATCAAAGCA GGGCTGACAA CTTCGGTCGA TGAGCTTGAA
CCTGTATATT TACGTGATAC AGTCACATGG AAAAAGTTAC CTGGTCGTGA ATAA
 
Protein sequence
MTITHEHSAC ILALDTCTES CSAALQYQGQ IYAELADAPR EHSQRLLPMV DSVLKQAGIS 
LDKVAAIAYG RGPGSFTGIR ICTSMTQGLA LGLDLPVIGI STLAAMAQMA ISEHQAEQVL
CAIDARMGEV YWGQFVAVDG IATLVGKEVV SAPANVQLQL DTEAPIVACG TGFDAYPDLL
ALGKGILALD AVKYPDARAM LILAETGIKA GLTTSVDELE PVYLRDTVTW KKLPGRE