| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_1875 |
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| Symbol | |
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| ID | 5753618 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009997 |
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| Strand | - |
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| Start bp | 2242235 |
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| End bp | 2242927 |
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| Gene Length | 693 bp |
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| Protein Length | 230 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641288156 |
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| Product | two component transcriptional regulator |
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| Protein accession | YP_001554306 |
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| Protein GI | 160874990 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00450797 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGCGTA TCGCCATAGT GGAAGATGAA GCGGCCATTC GCGAGAATTA CAAGGACGTG
CTGCAACAAC ACGGTTACAG CGTGCAAACC TATGCCGACA GACCATCGGC CATGTTAGCC
TTTAATACTC GTTTACCGGA TTTAGCCATT ATCGACATAG GTTTAGGCAA TGAAATTGAC
GGCGGCTTTA TGCTGTGTCA GTCATTGCGC GCAATGTCGA GCACGCTGCC GATCATCTTT
TTGACCGCCC GTGACAGTGA CTTTGATACT GTGTGTGGCC TGCGTTTAGG CGCCGATGAT
TACTTGAGTA AAGAAGTGAG TTTCCCCCAT TTAACTGCGC GCTTAGCGGC CTTATTTCGC
CGCTCCGAGC TTGCGGCCAG CCAAACGGCG CAGGAAAACC TGCTTGAGCG AGGTCCGCTG
ACGATTGATG CCAACCGCAT GCAAGTCTAT TGGAACCAAT TACCCATTGA GCTTACCGTC
ACTGAATTTT GGATGGTGCA CGCGTTAGCC AAACACCCGG GCCATGTGCG CAGCCGCCAT
GAGTTAATGC AAGAGGCGAA GATTTTTGTC GATGACAGCA CGATCACTTC CCATGTGAAA
CGTATTCGCA AGAAGTTCAT CGCCACCGCG CCTGAGTTTG ATTGTATCGA TACGGTTTAT
GGCATGGGTT ATCGCTGGGA CAGCTTAGCC TGA
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| Protein sequence | MKRIAIVEDE AAIRENYKDV LQQHGYSVQT YADRPSAMLA FNTRLPDLAI IDIGLGNEID
GGFMLCQSLR AMSSTLPIIF LTARDSDFDT VCGLRLGADD YLSKEVSFPH LTARLAALFR
RSELAASQTA QENLLERGPL TIDANRMQVY WNQLPIELTV TEFWMVHALA KHPGHVRSRH
ELMQEAKIFV DDSTITSHVK RIRKKFIATA PEFDCIDTVY GMGYRWDSLA
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