| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_1782 |
|---|
| Symbol | |
|---|
| ID | 5753518 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009997 |
|---|
| Strand | + |
|---|
| Start bp | 2136933 |
|---|
| End bp | 2137619 |
|---|
| Gene Length | 687 bp |
|---|
| Protein Length | 228 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 641288056 |
|---|
| Product | protein TolQ |
|---|
| Protein accession | YP_001554213 |
|---|
| Protein GI | 160874897 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0811] Biopolymer transport proteins |
|---|
| TIGRFAM ID | [TIGR02796] TolQ protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.0000000921899 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCAAGCTG ATATGTCGAT TGTTGGGTTA TTTTTACAAG CCAGTTTATT AGTGAAATTT
GTTATGTTCA CCTTACTTTG CTTGTCAGTG ATGTCTTGGA CGGTGATTTT ACAACGCCGT
AGCTTACTGA CATCCGCAAA AAGTAAATCG GCGAAGTTTG AAGACAAATT TTGGTCAGGT
GTTGATTTAA ACCGTTTATA TAAAGAATTA TCGACTCGTC CTGATAATAG CGGTTTAGAG
TCATTATTTG TGACTGGCTT TAAAGAATAT TCACGCCTGA ATAAATTAAA TAGCAAAGTG
CCCGATGCCG TGATGGACGG TACATCACGT GCTATGCGTG TGACACTTTC TCGCGAAATG
GAAAAGTTAG AAGCGAATTT ACCATTATTA GCGACCATTG GTTCGACTAG CCCTTATATC
GGTTTATTTG GTACGGTATG GGGGATTATG AATTCATTTA TCGCCATTGG TTCGATGGAA
AACGCGACCT TAGCTATGGT TGCCCCCGGT ATTGCTGAAG CCTTGATTGC AACGGCTATG
GGTCTATTTG CTGCGATCCC TGCGGTTATT GCGTACAACC GTTTCTCGAC TCAAGTCGAT
AAATTGGAAA TGGCCTACGC AAACTTTATG GAAGAGTTCT CCAGCATTTT GCATCGCCAA
GCATACAGTG AGAAGGAAGG GGCATAA
|
|---|
| Protein sequence | MQADMSIVGL FLQASLLVKF VMFTLLCLSV MSWTVILQRR SLLTSAKSKS AKFEDKFWSG
VDLNRLYKEL STRPDNSGLE SLFVTGFKEY SRLNKLNSKV PDAVMDGTSR AMRVTLSREM
EKLEANLPLL ATIGSTSPYI GLFGTVWGIM NSFIAIGSME NATLAMVAPG IAEALIATAM
GLFAAIPAVI AYNRFSTQVD KLEMAYANFM EEFSSILHRQ AYSEKEGA
|
|---|
| |