Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_1683 |
Symbol | |
ID | 5753419 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | + |
Start bp | 2031060 |
End bp | 2032007 |
Gene Length | 948 bp |
Protein Length | 315 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641287959 |
Product | patatin |
Protein accession | YP_001554116 |
Protein GI | 160874800 |
COG category | [R] General function prediction only |
COG ID | [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.234772 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.666571 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCTAACG GAACAACCCC TTCGGTTGGT ATTGCCTTGG GCAGTGGCGC TGCGAAAGGT TGGGCGCACA TTGGCGTGTT GAATGGCCTT GCCGCCATGG GGATCAAACC CGATAAAGTT GCGGGATGTT CGGTGGGCGC TTTAGTGGGC GCCGCGTACG CCCATGACCA TTTACCTGAA TTAGAAGAAT GGGTGCGGAG TTTCTCTAGC TGGGACGTGC TTGGCTTGAT GGACATTCGA TGGCGTAAAG GCGGTCTTAT CGGCGGTGAT AAAGTATTTG ATGTGCTGCA AGCTCGAATA GGGGATGTGA ATATTGAGAA CCTCAATCGT CCTTTTGCGG CGGTTGCGAC CGACTTGTAC TCGGGGCAGG AGATTTGGTT TACTGAAGGG GATTTACGTC AAGCGGTGCG CGCTTCTTGC TCTATGCCGG GGATTTTGGC GCCCGTGAGA CAAGGTGACC GCTGGCTTGT CGATGGTGCT GTGGTGAATC CAGTGCCTGT TTCTGTTAGC CGTGCCATGG GCGTCGATGT AGTGATAGCC GTGGATTTAT ATGGTTATCA TTCTGGTCGC ATCCAAGTAT TGCCGGTGAG CATGACGAGC CAAAAAAACG TTGAAGCTGA AATGGATATG TCAGCGCGAC AAGAAACTGG ATTTATGGAT TTGTTTGCCC GTGGCCGAGA TTATGTCAGC AATCTGACCG ATAAGTTTTC ACTTGGCACT AAATCGAATC CAGGCATGAT TGCTGTAATG TCGCAATCTA TGGGCATTTT AGAGCAAAGA CATAAACGGG CGCGCTTGAT GGGCGATCCG CCAGATATTT GTATTGTGCC TGAGGTTGGC AATATCGGCA CTATGGAGTT TCACCGTGCT GATGAGGCGA TTGCCGCTGG TGAAGCTGCT GTGGAGAAGG TGGCTCACTT GATTGAAGCT GCACTGTGGA AGGGCTAA
|
Protein sequence | MANGTTPSVG IALGSGAAKG WAHIGVLNGL AAMGIKPDKV AGCSVGALVG AAYAHDHLPE LEEWVRSFSS WDVLGLMDIR WRKGGLIGGD KVFDVLQARI GDVNIENLNR PFAAVATDLY SGQEIWFTEG DLRQAVRASC SMPGILAPVR QGDRWLVDGA VVNPVPVSVS RAMGVDVVIA VDLYGYHSGR IQVLPVSMTS QKNVEAEMDM SARQETGFMD LFARGRDYVS NLTDKFSLGT KSNPGMIAVM SQSMGILEQR HKRARLMGDP PDICIVPEVG NIGTMEFHRA DEAIAAGEAA VEKVAHLIEA ALWKG
|
| |