| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_1674 |
|---|
| Symbol | |
|---|
| ID | 5753410 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009997 |
|---|
| Strand | - |
|---|
| Start bp | 2019338 |
|---|
| End bp | 2020225 |
|---|
| Gene Length | 888 bp |
|---|
| Protein Length | 295 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 641287950 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_001554107 |
|---|
| Protein GI | 160874791 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.126025 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.261555 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTGACCG AACTGCCACC ACTTAATTCC CTCCGAGCTT TTGAAGCGGC TGCACGCTTG
CAGAGCATGA CATTAGCCAG CAAGGAGCTG CATGTCACCC ATGGTGCGGT CAGTAAACAA
ATCCGAGTAT TAGAGGATTA TTTGGGTTTT GCGCTTTTTG TGCGCTTACA TAAAAAAGTC
AGTTTAACCG ATGAAGCCAA GCGCTATTTG CCCCATGTCC AAGCCGCGCT GCAAACCCTG
TCAAGTGCAA CGAGTGACCT ACGCCGCCAG CCTTCTAAGC CACAAACCTT AGCCATCAAT
GTGCTGCCAA GCTTAACCAT TAATTGGCTC ATCCCGAGAA TGGAGCAGTT TAAGTCCCGC
CATCCGCACC TTTATGTCGA TTTGTCGATT GGTGACTTTG CCGTGGACTT TAGCCAAGGC
CGTTATGATA TTGCGATTCG CAGCTGCACA GTCATTCCTA AGGGCGCGAA TTATATCAAG
CTGATGGATG AAGATTTGTG TTTAGTTTGC GCGCCATCAC TAGCGCCAAA ACTGCAAAAC
ATTGAGGATA TCAATCACGT CACCTTACTG AAACACACGA CAAGACCCGA ATTGTGGGAA
TATTGGGCAG AAAAAGTGGG CTTAACCCTT ACTCAAGCGC AATCCTTTGG TGTCGAGCAT
TTCTACATGC TCAGCCAAGC CGCCGCGAGT GGCATGGGGG CAGCGCTTAT TCCGCGATTC
TTTATCGAAG ATCAATTGGC AAACGGCAGC TTAGTCATTC CCTTCGACGC CCCTTTCACT
AGCCCCTATC GATATTACTT ACTCACGCCC AAGTCCCCTA GCTTGCCGTT AAAAGCCCAA
GCCTTTATTG ACTGGTTATT AGAAGTGTTT GCCCCTTATC GCCACTAA
|
|---|
| Protein sequence | MLTELPPLNS LRAFEAAARL QSMTLASKEL HVTHGAVSKQ IRVLEDYLGF ALFVRLHKKV
SLTDEAKRYL PHVQAALQTL SSATSDLRRQ PSKPQTLAIN VLPSLTINWL IPRMEQFKSR
HPHLYVDLSI GDFAVDFSQG RYDIAIRSCT VIPKGANYIK LMDEDLCLVC APSLAPKLQN
IEDINHVTLL KHTTRPELWE YWAEKVGLTL TQAQSFGVEH FYMLSQAAAS GMGAALIPRF
FIEDQLANGS LVIPFDAPFT SPYRYYLLTP KSPSLPLKAQ AFIDWLLEVF APYRH
|
|---|
| |