Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_1655 |
Symbol | |
ID | 5753391 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | + |
Start bp | 1998898 |
End bp | 2001690 |
Gene Length | 2793 bp |
Protein Length | 930 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 641287931 |
Product | TonB-dependent receptor |
Protein accession | YP_001554088 |
Protein GI | 160874772 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG4206] Outer membrane cobalamin receptor protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.375074 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0861797 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATAGAA ATAATATTTT GACTCACTCG ATTCGTACTG CATTAATAAG TGGTGTTGCA GTTGTAGCAT TTACAACACC TGTTGCATTT GCCGCTGAAG ATGGTGCAAA AGTAGAACGT ATTGAAGTAA CTGGGTCACG TATCAAGCGC ACAGATATGG AGTCAGCTAG CCCTGTATTG TCGATGAATC GTGATGAGAT TGAAGCGACA GGGATGATAA GTATTGGTGA TATTCTTCAA ACAATCCCTG CTGCAGGATC TGCATTAAAT ACCGCATTTA ACAATGGTGG TAATGGTTCA ACTAACATGG ACCTTCGTAA TTTAGGTTCT CAACGTTTGT TGGTTTTGGT AAACGGTAAA CGCTGGATAT CTTCATTAGG TTCAACAGTA GATTTAAACA CTATACCTAC GTCAGCAATT GAACGTATTG ATGTGCTTAA AGATGGCGCT TCTGCAGTTT ATGGTTCTGA TGCGATTGCT GGTGTAGTAA ACATTATTAC TCGTAAGAAC TTTGAAGGTG TTGAAGTTTC TGTTTATGGT GGCCAAAACT CAAAATACGA TGATGGACGT CAGTATACTG CAGATATTAC CTTTGGCTCA GTATCCGAGA AAGGTGGCTT ATTATTTAAT ATGAGCCATG TGACTCAGCA ACCAATATGG GCTGGCGATA GGGATATATC AGCTACGGGT TATAGCTCAA CGGCAGATAA TACTCGTTTG AAAGTAAAAG GATCCCAGTT TAATCAAGCT AACCAAGATG CTCTTGCGGC TGTCGGGACT GCAAATAGTT CGGGCATTTA TGATTTTATG TCGAAAGAAG GCACAGGTGT TAACGTTGGT GTTGACCAAT TGCGTCCTCG AACTGGCAGT GATGTTTATA ACTTTGCGCC GGATAACTAC TTATCAACGC CGCAGAATCG TAACTCATTC TATGTACAAG GTTTTTATGA TATTTCAGAT GACCTACGGT TTGTGTCTGA TTTTATGATG ACCAATCGTA AATCATCACA GGAATTAGCG CCAATGCCAC TAACACTTGG TGCTTCATTT GGTGAAGCTG CAAGTCGAGT AGATATTGGA GCAAATAATA TTTACAACCC ATTTGGCGAA AAGCTTTATG GTAGTAATGC TCGTGCTGTT GCTAATGGTG AAGCGGCAGG TTATGTACCT TATGCATTAC AGCGTCGAAT GATAGAGGCG GGTTCCCGTC AATATAATCA AAATGATACC ACGTACCGAG CTATGGTTGG GTTAGAAGGC AACATTGGTG ATAATTGGAC TTGGAGCGCA ACATATATTT ACGGCCAAAA TAACCAAGAT ATATTAACCA CTGGATTGTT AAATTTAACA CGTATTAATC AAGCGCTTGG TGATGATTGT AATGCAGCAA ACGGATGTGT AGCTCTTAAC TTATTTGGTG GACCGGGAAC TATTACTGAA GATATGGTCG ATTACATTAC ATTTGATAGT GTAAGCCGTT CAGGTTTGAC GATGAAAGAT TATGCTTTCA ATATTTCAGG GGATTTATTT GATTTACCAG CTGGTGCAGT AGGTATTGCA ATAGGTCTAG AGCGACGTGA GGAGTCGGGT TTTGATACTC CAGACCCATT AACTGTTACT GGTGAATCAT CAGGTAACCA ACGTGATGCT ACCGCTGGTG GTTTCCGTCT AGATGAAGCT TATACTGAGC TTTCAATTCC TATTTTAGAA AACTTATTGT TAACACCAGC GATTCGCGTA TCTGATCATG ACGCTTATGG TAATAGCACT ACTGGGAAAG TGGGCTTAGA ATTCCGCCCA ATGGATGATA TGTTGCTTAG GGGTACATGG GCACAAGGAT ATCGTGCTCC ATCTATTTCT GATCTTTATG CTGGTAATGC TGATTCTTAT CCAACTTGGA CAGACCCATG TAACACTCGT GATGACAAAG GTAATCCAGT TGATATTTCT GGTAAACCAG GTTGCGCGGC TGTACCAGAC GGCTACCGTC AGGCTAATAC CCAGATCCGG ATTTCACAAG TATCTTCTCC TGATTTAAAA CCTGAAACTT CTGAGTCCTA TACTTTTGGA ACGGTTTATA ATCCATCTTG GCTAGAGGGT GCAGAGCTAA CATTAGATTA TTATAATATT AAAGTGGAAG ATGCTATTGG CCGTTACGGG CATACTCGAA TTGCAACTGA GTGCGCTGAT GGCGATAATC AAGCTGCTTG CGGCAATATT GACCGCGATA GCCTAGGCAA TATTGTTGAT TTACGTAACT ACTTGCAAAA TGCGGGGACT TATGAAGTTG AAGGCGTTGA TTTCTTCACT GCTTATCGCT TCCCTGAGTC ATCGTTTGGT ACATTTAAAG CGTCTCTAGA TCTGGCTTAT GTCATCAATA ATAAATCTGA TGGAGAGGAC CGTGCAGGTA TACAATTTGG GGATGGTGGT TTTCCTAAGT TAAAAGGAAA TTTGAATATT GACTGGGTAA TGGGTGATTG GGACGCTCAT TGGAAAACTC GATATGTTGG AGCCATGGAT AACGATTACG TCGAAACCTA CGGTTTTACT GCTGCCAAAA ATGGTATTAC AGAACGATTC GATTCATATA TGGTCCACAA TGTTTCAGTT GGTTATAACT TTGATAGTTA CAATACAAAA GTTGCAGTGG GTATAAATAA CTTATTTGCA AAGGAACCAC AGTGGGAAGC TCCAGATAAT GGCTTGGCTA TTTCTACAAA TAATTTCTCT GTGACTGAGT ATGATGTAAA CATGGACAGA TTTGTGTATT TGCGTGCAAC GACAAAGTTC TAA
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Protein sequence | MHRNNILTHS IRTALISGVA VVAFTTPVAF AAEDGAKVER IEVTGSRIKR TDMESASPVL SMNRDEIEAT GMISIGDILQ TIPAAGSALN TAFNNGGNGS TNMDLRNLGS QRLLVLVNGK RWISSLGSTV DLNTIPTSAI ERIDVLKDGA SAVYGSDAIA GVVNIITRKN FEGVEVSVYG GQNSKYDDGR QYTADITFGS VSEKGGLLFN MSHVTQQPIW AGDRDISATG YSSTADNTRL KVKGSQFNQA NQDALAAVGT ANSSGIYDFM SKEGTGVNVG VDQLRPRTGS DVYNFAPDNY LSTPQNRNSF YVQGFYDISD DLRFVSDFMM TNRKSSQELA PMPLTLGASF GEAASRVDIG ANNIYNPFGE KLYGSNARAV ANGEAAGYVP YALQRRMIEA GSRQYNQNDT TYRAMVGLEG NIGDNWTWSA TYIYGQNNQD ILTTGLLNLT RINQALGDDC NAANGCVALN LFGGPGTITE DMVDYITFDS VSRSGLTMKD YAFNISGDLF DLPAGAVGIA IGLERREESG FDTPDPLTVT GESSGNQRDA TAGGFRLDEA YTELSIPILE NLLLTPAIRV SDHDAYGNST TGKVGLEFRP MDDMLLRGTW AQGYRAPSIS DLYAGNADSY PTWTDPCNTR DDKGNPVDIS GKPGCAAVPD GYRQANTQIR ISQVSSPDLK PETSESYTFG TVYNPSWLEG AELTLDYYNI KVEDAIGRYG HTRIATECAD GDNQAACGNI DRDSLGNIVD LRNYLQNAGT YEVEGVDFFT AYRFPESSFG TFKASLDLAY VINNKSDGED RAGIQFGDGG FPKLKGNLNI DWVMGDWDAH WKTRYVGAMD NDYVETYGFT AAKNGITERF DSYMVHNVSV GYNFDSYNTK VAVGINNLFA KEPQWEAPDN GLAISTNNFS VTEYDVNMDR FVYLRATTKF
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