Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_1653 |
Symbol | |
ID | 5753389 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | + |
Start bp | 1994542 |
End bp | 1996971 |
Gene Length | 2430 bp |
Protein Length | 809 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641287929 |
Product | DNA polymerase II |
Protein accession | YP_001554086 |
Protein GI | 160874770 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0417] DNA polymerase elongation subunit (family B) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.112928 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0896662 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGCCTG AGGCAACAAC GGCCGTTAGT GTACAAGGTC GAGTCTTAAC ACGCCATGCG ATTCATCGTC ATGGGAGTTT AGTGTTGCAG TATTATCTGG CGACCGCCCA AGGTCCTGTG CTGGTGGAAG TGCAAGGCAC TGAACACATT TGTTTTTGTC ATCAAACGGA TGTGGCGGCT TTACAGTTAC AAACGCCGGG TCAAGCATTG CGATTTGTGC CATTAGCGCT CAAAAGCTTT AAAGGCGGCT CCGTCAGTGG AGTTTATGCT AAATCGAGCA ACAGCTTACG TACCTTACAG CGCATCGCAA AAGATGCCGA TATCCCTTTA TTTGAAGCGG ATATTCGCCC TGAACAGCGT TATTTAATCG AGCGGTTTGT GGCGCTGGAT GTGGCATTTT TAGGGCATTT CTCTGCGCCG ACTAGCGACA GTCTTGAGGC TAACTCGCTG CCCGTGTTTA TCGCCGAGCG GGCTAAGAGT ATTGCCCCTT TAACGGCGGT GAATTTACGC TGTATCTCAC TGGATTTTGA ATGCAGCTTT GAGGGCTTAC TCTATTCGGT GGCGCTATAT GGTCAAGACA GTGGCCGAGA CGAGGGGCAA GGCAGCCTCA AGCAGACTTA TGAAAAAGTG ATTATGGTGG GCGAAGCTGA ATCAAACACC CCCGAATATA TTGAATGGGT GGCCGATGAA GCGGCGCTGA TCCATCGATT AATCGCGTGG TTCCATGAGT TTGATCCTGA CTTTATTATC GGTTGGTCAG TGGTGAGTTT CGATCTCGCG CTATTGTCAC GCCGTGCTCT ATTACACCGT ATTCCGCTCA CCATTGGCCG CGGTGGCGCT AAGCTCGATT GGAAAGTTGA CAATAAGTTT CGCCCAGAAA CCTTAGTTTT GCCGGGCCGT GTGGTACTCG ATGGTATCGA TTGGCTTAAA GCCGCTTTTT ATCACTTTGA GCGTTTTTCG CTTGAATTTG TGTCACGGCA CCTATTAGGT GAAGGCAAGG CCATTCATAA CGTCGATAAT CGCGTTGAAG AAATTGACCA GCTGTTTAAG ACCGATAAAC AAGCCTTAGC GCATTACAAT CTTACCGATA GCCGCCTAGT GTGGGATATT TTTACTCACA CTCAATTGTG GGATTTTGCC CTCGCGCGTG CTGAACTGAC AGGTTTAGAA CTGGGACGGG TAGGGGCCTC AGTGGCGGCG TTTAATCATT TGTATTTACC GCATCTACAT CGCGCGGGTT ATGTCGCTCC TGCAGAGCCT GTGAGTCAGG GCATTGAAAG TCCTGGTGGT TACGTGATGG ATTCTGTGCC GGGTCTTTAT AAACACATCT TAGTGTTCGA TTTTAAAAGT CTGTATCCCT CCATTATTCG CACCTTTTTG ATCGATCCTA AGGGATTGAT TGAAGGCTTG CAGTTGCCGG AGTCTGACTG TGTTGCGGGG TTTCTCGGCG GCCGTTTCAG TCGGCAACAG CCTATTTTAC CTAAGCTTAT CCAAACCTTA TCTGAGCAGC GAGAAAAGGC CAAGCGTGAG CACAATGCGC CGTTATCCCA AGCGATAAAA ATTATCATGA ACTCGCTGTA TGGGGTTTTA GGTTCTCAAG GTTGTGTGTT CCACGATGCA AAGTTAGCAA GTTCGATCAC TATGCGCGGC CATCAAATCA TGAAACAAAC CCGTGCATGG ATAGAAGAGA TGGGCTATCA AGTGATTTAT GGCGATACGG ATTCGACCTT TGTCTGGCTT GGCAGCGAGC CTGATCTCTC AGACATTAAC GCCTTGGGTA ACATTCTGGC GCAGGATATC AATGCTAAGT GGCAGGCTAA AATCTGTGCT GATCACCAAG TTGAGAGTTT TCTCGAGTTA CAGTTTGAGC GGCATTACGA GCAGTTCTTT ATGCCAACCT TAAGAGGCTC ATTAGAAGGC AGTAAAAAGC GTTATGTTGG CGCGTGGCGC AATGCGAGCG ATGAACTTGA GCTCACCTTT AAAGGTATGG AACAAGTGCG CAGTGATTGG AGCCCCTTAG CGCGCAAAGT CCAAGAGTCA CTCTATGAGC GAATGTTTAA CCAAAGGGAT ATCAGTGTTT ATTTAGCCAG CGTGTTTGAA AAATTACTTG ATGGTCAGTT GGATAATGAT TTGGTATTTC GTAAACGCAT GCGGCGCAAT ATCGAAGATT ACACGGCTAA ATCTTCACCA CATGTTAAAG TCGCCCAGCA ACTATGCGAC GTAACAGGTG ACACCACTTT TGGCAAGCAT GGGGCGCAAA TTGACTACCT GATTACTGTA AATGGACCGG AACCCTTACT GTACAGAACG TCACCAATTG ATTACCAATA CTACATTGAT AAGCAAATTG GCCCTATTGC AGAGCCGGTA TTTTCGATAA TGAAACTAAA CTACATGGAT ATTGCGTCAA AGCAGTTGCT GTTAATATAG
|
Protein sequence | MKPEATTAVS VQGRVLTRHA IHRHGSLVLQ YYLATAQGPV LVEVQGTEHI CFCHQTDVAA LQLQTPGQAL RFVPLALKSF KGGSVSGVYA KSSNSLRTLQ RIAKDADIPL FEADIRPEQR YLIERFVALD VAFLGHFSAP TSDSLEANSL PVFIAERAKS IAPLTAVNLR CISLDFECSF EGLLYSVALY GQDSGRDEGQ GSLKQTYEKV IMVGEAESNT PEYIEWVADE AALIHRLIAW FHEFDPDFII GWSVVSFDLA LLSRRALLHR IPLTIGRGGA KLDWKVDNKF RPETLVLPGR VVLDGIDWLK AAFYHFERFS LEFVSRHLLG EGKAIHNVDN RVEEIDQLFK TDKQALAHYN LTDSRLVWDI FTHTQLWDFA LARAELTGLE LGRVGASVAA FNHLYLPHLH RAGYVAPAEP VSQGIESPGG YVMDSVPGLY KHILVFDFKS LYPSIIRTFL IDPKGLIEGL QLPESDCVAG FLGGRFSRQQ PILPKLIQTL SEQREKAKRE HNAPLSQAIK IIMNSLYGVL GSQGCVFHDA KLASSITMRG HQIMKQTRAW IEEMGYQVIY GDTDSTFVWL GSEPDLSDIN ALGNILAQDI NAKWQAKICA DHQVESFLEL QFERHYEQFF MPTLRGSLEG SKKRYVGAWR NASDELELTF KGMEQVRSDW SPLARKVQES LYERMFNQRD ISVYLASVFE KLLDGQLDND LVFRKRMRRN IEDYTAKSSP HVKVAQQLCD VTGDTTFGKH GAQIDYLITV NGPEPLLYRT SPIDYQYYID KQIGPIAEPV FSIMKLNYMD IASKQLLLI
|
| |